Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01585 ATGAAAACTGTGAAGGAATGGTTCAGTTCATCCCAGGTTGTAATGAGCATGTTTCTGGTGCAAGTTCTTATGACTGGGATGCAATTACTGTCAAGGCTCATATTGGTTCAAGGAACTTTCATTGGTGCACTTATTGTTTATCGTCACCTTGTTGCTGCTGTTTGTGTTGCTCCATTTGCACTCTACCTTGAAAGAGGAAAACCAAAGAAATTAAACTGTGAGGTCTGGTGTTGGCTCTTCGTCAATGCACTAACAGGGATGACAATGGCTCAAGGATTGTTTTATTATGGTCTGCGAGATACTTCTGCTGCGTACTCTATGAGTTTTCTGAACTTGGTTCCTATAATCACATTCTTTACCTCTATCATACTCAGAATGGAGAAACTGAAGTGGCAAACATGGGTTGGTAAAGCTAAGTCTGTTGGGTCAATTCTATGTGTTGGAGGAGCATCACTTAGCAGTGTTTACAAAGGGAAGGAATTTTTTCTCGGACACCATATTCATCATACTCATCAAACTGCACCACACAAAACCCACATGCTACATGGTACTATCTTTTTGGTTTGCAGCTGCTTCTCCTACACAGCCTGGTTTATTGCACAATGGTTTCTCCATCTGGGTCTTCCGGTTCTTGATGAAATTCTCCATATTTTCAATTTAAAAAAGGTGAAGTTGCTTAAAGTATTTCCATTGAAGTACTGGGGAACAATGCTAGCATGCATTCTGGCAGCAATTCAAGCAGCAGCAGTAGGTGTTTTCTTAGATTCCAGTAAAGCTGCTTGGAGATTAGAGTGGAATCTACAACTCATCACTATAGTCTACTCGGTACAAGCTCTCATTCTTGGACAACCATTGGGAGTTGGAACGTTGGGTGGCATGGTTTTGATCATAATGGGATTATACTTCTTTTTGTGGGGCAAAAGCAATGAGACAGATGCAGAAGGAACAACCACTGCAACCCAATCAACATCCACAGTAGTACCAAGTGCTTCTCCCACCCATTCTGTGCTTCTTCAAATTCAAAAGACTTAG 1032 0.4128 MKTVKEWFSSSQVVMSMFLVQVLMTGMQLLSRLILVQGTFIGALIVYRHLVAAVCVAPFALYLERGKPKKLNCEVWCWLFVNALTGMTMAQGLFYYGLRDTSAAYSMSFLNLVPIITFFTSIILRMEKLKWQTWVGKAKSVGSILCVGGASLSSVYKGKEFFLGHHIHHTHQTAPHKTHMLHGTIFLVCSCFSYTAWFIAQWFLHLGLPVLDEILHIFNLKKVKLLKVFPLKYWGTMLACILAAIQAAAVGVFLDSSKAAWRLEWNLQLITIVYSVQALILGQPLGVGTLGGMVLIIMGLYFFLWGKSNETDAEGTTTATQSTSTVVPSASPTHSVLLQIQKT 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01585 343 Pfam EamA-like transporter family 16 147 IPR000620 GO:0016020
Vimu1g01585 343 PANTHER WAT1-RELATED PROTEIN 12 276 IPR030184 GO:0016020|GO:0022857
Vimu1g01585 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01585 Vimu-Chr1 15010651 15014660 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01585 1 312 Nodulin-like Gene Family AT5G07050 25.967 4.65e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01585 - - vra:106763417 529.635