Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01584 ATGAACCTGGTCAATGTTGCAGCTGTTCCTGGACTGCCCATCGTAGGGAATCTACTGCAGTTGAAGGAGAAGAAGCCTTACAAGACCTTCGCACGGATGGCTCAAAAACATGGACCTATCTATTCCATCAGAACCGGTTCTTCCTCTATCATTGTTCTCAACTCCACCAATCTTGCCAAGGAGAGTTGGATGAATACAATCACAAACAGTTGTAAAGGCGATGACTGGTTTTATGGTCGATCCACTGAAGTAACTTTGGCCATGGTGACCAGGTTTTCGTCGATTTCAACAAGGAAGCTATCAAAAGCACTGACCATTCTGACTTCTGATAAACGTATGGTTGCCACAAGCGATTACAATGATTTTCACAAAACGGTCAAAAAACATATCCTTGGAAACGTTTTGGGAGCCGCTGCACAGTGTCCATTTTTCAATGTTCAGAAGCGGCACCGTCTCAACAGAGAAAACTTGGTGGAAAATATTTTGAGCCAGTTTAGTGAACATGTGAAGACCTTCTCTGATTTGGCAGTTAATTTTAGAAATATATTCGCATCTGAACTTTTTATATTAGCACTGAAGCAAGCTCTGGGAAGTAATATAGAGTCCGTTTATGTGGAGGAGCTTAGGGCTACATTATCAAGAGAGGACTTATATAGGATTCTAGTGCTTGATATGATGGAGGGAGCCATTGAGGTGGATTGGCGAGATTTCTTTCCATACTTGAGGTGGATTCCTAATAGGAATGTGGAGAAGAAAATTCAGAATTTGTATTTCCGGAGAGAAGTTGTCATGAAGGCCTTGATGAATGAGCAGAAGAAGAGAATGGATTCAGGAAAGGTACTGAATTGTTTTTATGACTACCTAGTATCCGAAGCTAAGGAACTGAGTGAACTTGAAATTTCCATGCTACTCTGGGAGACAATTGTTGAAACATCTGATACTACATTGGTGACAACAGAATGGGCTATGTATGAACTTTCTAAAGACAAAACTCGTCAGGCACGTTTATATGCGGAGCTGCAAAATGTATGTGGAGAAGAAAAGGTTACAGAGGAGCAATTATCTAAGCTACCTTACTTGGGAGCTGTATTCCATGAAACATTAAGGAAGTATAGTCCAGCTCCAATCGTGCCAATAAGATATGCTCATGAAGATACAGAATTGGGAGGATATCATATTCCTGCTGGAAGCCAGATTGCAATAAATATATATGGATGCAACATGGACAGCAACAAGTGGGAAAATCCTCATGACTGGATGCCTGAGAGATTTGTTGATGAAAAATATGACCCCTTGGATTTATACAAGACCATGGCCTTTGGAGCTGGGAAGAGGGCCATGTTGATATCCTGCACAGCAATTGGGAGATTTGTTCAACAATTTGAGTGGGAGCTGGGACAAGGGGAGGAGGAGAATACTCCATCCCCTTCTGGTGAAACTCAGGCCAAGAAATCAATACATCAAGTAGTTACATTTGCTATTGCTGCCTTCTGA 1494 0.4163 MNLVNVAAVPGLPIVGNLLQLKEKKPYKTFARMAQKHGPIYSIRTGSSSIIVLNSTNLAKESWMNTITNSCKGDDWFYGRSTEVTLAMVTRFSSISTRKLSKALTILTSDKRMVATSDYNDFHKTVKKHILGNVLGAAAQCPFFNVQKRHRLNRENLVENILSQFSEHVKTFSDLAVNFRNIFASELFILALKQALGSNIESVYVEELRATLSREDLYRILVLDMMEGAIEVDWRDFFPYLRWIPNRNVEKKIQNLYFRREVVMKALMNEQKKRMDSGKVLNCFYDYLVSEAKELSELEISMLLWETIVETSDTTLVTTEWAMYELSKDKTRQARLYAELQNVCGEEKVTEEQLSKLPYLGAVFHETLRKYSPAPIVPIRYAHEDTELGGYHIPAGSQIAINIYGCNMDSNKWENPHDWMPERFVDEKYDPLDLYKTMAFGAGKRAMLISCTAIGRFVQQFEWELGQGEEENTPSPSGETQAKKSIHQVVTFAIAAF 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01584 497 SUPERFAMILY Cytochrome P450 9 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g01584 497 Gene3D Cytochrome P450 6 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g01584 497 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g01584 497 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g01584 497 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g01584 497 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g01584 497 PRINTS E-class P450 group I signature 34 53 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g01584 497 Pfam Cytochrome P450 11 62 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g01584 497 Pfam Cytochrome P450 229 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g01584 497 CDD CYP77_89 36 472 - -
Vimu1g01584 497 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 5 473 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01584 Vimu-Chr1 14979158 14981483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01584 3 473 Cytochrome P450 AT5G25900 58.246 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01584 K04122 - gmx:100802970 709.138