Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01557 ATGGCCAAAATCTGGATTGAAGTGTGCTTGATATCAGCACGTGGTGTGAGGGGTTCACCCTCACTTTGGAAGCGTCAGTGGTATGCAGTTGGGTGGGTTGATCCTAAGAACAAGTACTGTACCAAAGTTGATGCTTCTGGTAATGCCAACCCTCTTTGGAGGACCAAGTTTGGCATCCAGGTTGATACCTCCGACCCAGATCTGGCACTCCACTTGGAGGTTTATAGCAGAGATCCTTTGTTCCTCACAGAGAAGCTTCATGGCTCCGCAACAGTTGTTCTCAGAGAGTTTTTGGCCAAGCAGGTCCACAACTCTGAGGAAGTAGGAAGCTACCAGTTGAGAAAGAAGAAATCTAACAAACCAACTGGCTTCATTGATGTTTCAATCCGTCTTTCTGAGAACAAGGAGGACCCTAGTTTCCACCCACAAGGTAATGGGGAAGGAATAGTGATGCTAGATTATGGCAATAATACTCACTTGACCACAGGGGGTGGATTTGGACAGGCCTACCCACAGCAAAAGCCTCAAGCTTCATTCCATCATTTCCATGGGACAGGAAAACAGACCCAAAATAATGTCCCCTACACATATCCAGTGCCATTTCCTGCAGACTACGCTACTAATCCTCCTTATATGAGTGGACCAAGCTATCCTGCAGCTACTGGACCAAGTTATCAAACACCCAGAACAACTCCTGCACCACCACACTCAAATGTCAATCATGCTCCCACTTTTTTCCCAGGTAACGGTGGCATGGCACCTAGTTATTTTAACATGCCATCATCATCATCATCATCATCATCTGGGGCAGGTCCTAGGCCAAGAGGGCCTCCAGGATTTGCAATTGGGGCAGGTGCAGGAGCATTGGCAGCTGGGGCTGTAATGTTTGGTGATAACTTCATGTCACAATTAGGTGATCCCACTCTTACCGTTGCCACTGACCCTCTTTTCTGA 954 0.4748 MAKIWIEVCLISARGVRGSPSLWKRQWYAVGWVDPKNKYCTKVDASGNANPLWRTKFGIQVDTSDPDLALHLEVYSRDPLFLTEKLHGSATVVLREFLAKQVHNSEEVGSYQLRKKKSNKPTGFIDVSIRLSENKEDPSFHPQGNGEGIVMLDYGNNTHLTTGGGFGQAYPQQKPQASFHHFHGTGKQTQNNVPYTYPVPFPADYATNPPYMSGPSYPAATGPSYQTPRTTPAPPHSNVNHAPTFFPGNGGMAPSYFNMPSSSSSSSSGAGPRPRGPPGFAIGAGAGALAAGAVMFGDNFMSQLGDPTLTVATDPLF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01557 317 CDD C2_SRC2_like 6 127 IPR044750 GO:0006952
Vimu1g01557 317 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Vimu1g01557 317 PANTHER INGRESSION PROTEIN FIC1 6 262 - -
Vimu1g01557 317 Gene3D C2 domain 5 147 IPR035892 -
Vimu1g01557 317 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 131 IPR035892 -
Vimu1g01557 317 MobiDBLite consensus disorder prediction 255 271 - -
Vimu1g01557 317 MobiDBLite consensus disorder prediction 217 279 - -
Vimu1g01557 317 MobiDBLite consensus disorder prediction 219 244 - -
Vimu1g01557 317 Pfam C2 domain 8 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01557 Vimu-Chr1 14571369 14572799 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01557 - - gmx:100788042 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01557 1 14571369 14572799 Vimu10g01531 10 16974304 16978084 PCT