Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01529 ATGGCGTCGTCGGCGTGCGTCACGGACTTGGCTCGAACGGCGGCGTGCAGGGATGGCGCGGCGGCAGCGCATCTAAAAGTGGTGTCAATCTTCGTTATTTTCGTGACGAGCGTGGCGGGGATGTCGTCGCCGGTGCTCCTAGCCGGGATCTTCCGCGGGAAGCCGCTCTACGACAAGGCCATAGTCGTGATCAAGTGTTTTGCGGCGGGGGTGATTCTCTCGACCTCGCTGGTCCACGTGCTCCCCGACGCGTACGCCGCACTCGCCGATTGCCAGGTGGCGTCGCACCACCCGTGGAAGGACTTTCCTTTCGCAGGACTCGTGACGCTTGTGGGCGCTCTTCTGGCGCTCCTGGTGGACCTCGCGGCGAGCTCGCACGTGGAGCACGCGCAGTACGCGCCGGTAGTGGCGCAGGAGAAGGAGTTGGAGCTCGGCGGAGGCTGCCATGGGTCCGGCGGTGATGGTGAAAGAGGTGAAGAATTGGTAAAACTGAAACAGAGGTTGGTTTCGCAGGTGCTTGAAATTGGGATTATTTTTCACTCTGTGATAATCGGACTTACCATGGGAATGTCTCAGAACGTTTGTACTATTCGACCTCTCGTTGCTGCTTTGGCATTTCATCAAATATTTGAAGGCATGGGTCTCGGTGGTTGCGTCGCTCAGTCACAAGAGAAAAGACCATTGCGAATTGGAAACCGTGATTTGTATATTTTTGAGATCATAGATTCACCCTTGACAACACCAATGGGAATAATTTTGGGGATGGCATTGTTCTCAGTGACAGGTTACGATGATAACAATCCAAATGCTTTAATCTTGGAAGGGTTATTGGGTTCAATTTCATCAGGAATACTAATTTATATGGCATTGGTTGATCTTATAGCAGTTGACTTTTTTCACAACAAGCTTATGAACTCTACTCGTCAGTTGAAGAAAATATCTTTTCTTGCTTTGACCATTGGTTCTGCTACAATGTCTATCCTTGCCTTGTGGGCTTGA 999 0.5145 MASSACVTDLARTAACRDGAAAAHLKVVSIFVIFVTSVAGMSSPVLLAGIFRGKPLYDKAIVVIKCFAAGVILSTSLVHVLPDAYAALADCQVASHHPWKDFPFAGLVTLVGALLALLVDLAASSHVEHAQYAPVVAQEKELELGGGCHGSGGDGERGEELVKLKQRLVSQVLEIGIIFHSVIIGLTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQSQEKRPLRIGNRDLYIFEIIDSPLTTPMGIILGMALFSVTGYDDNNPNALILEGLLGSISSGILIYMALVDLIAVDFFHNKLMNSTRQLKKISFLALTIGSATMSILALWA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01529 332 PANTHER ZINC/IRON TRANSPORTER 22 326 - -
Vimu1g01529 332 Pfam ZIP Zinc transporter 24 129 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vimu1g01529 332 Pfam ZIP Zinc transporter 149 329 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vimu1g01529 332 NCBIfam ZIP zinc/iron transport family 13 332 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01529 Vimu-Chr1 13969007 13971113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01529 1 332 Inorganic Solute Cotransporters AT2G30080 62.931 2.82e-147 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01529 K14709 - gmx:100797310 454.136