Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01519 ATGGGTTCTTCATCCTCTTATTCCTCCTTCTCTTCTTCTTCTTCTTCTTCTTCTGCTTTGTCCTCCTCCTCCTCATCTTCTTCTACTGTGAACAATCCCACCTGCATGCAGTGCAACTCCAACATTACAACCTTGGTTACGGGGTGGCCTCTTGGTGATGGTAATGTAGCTCAGCTCTGCCACCGATGCGGCATATTCTATCAAGAAGGAACGTTTTGTGAGACATTTCACAGGAACTCTACGGGATGGTTAGAGTGTGCAGTTTGCCTGAAGAAGTTGCATACTAATTGCATTGTGTCAAGGTCAGAAGTTCACTTCACGTTGTTTGGAAGACTTTGTTGCAAGGTTTGTGCAACGAAACTGATTCGAAGATGA 375 0.448 MGSSSSYSSFSSSSSSSSALSSSSSSSSTVNNPTCMQCNSNITTLVTGWPLGDGNVAQLCHRCGIFYQEGTFCETFHRNSTGWLECAVCLKKLHTNCIVSRSEVHFTLFGRLCCKVCATKLIRR 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01519 124 MobiDBLite consensus disorder prediction 1 33 - -
Vimu1g01519 124 ProSitePatterns Zinc finger PHD-type signature. 35 117 IPR019786 -
Vimu1g01519 124 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 35 120 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01519 35 118 B3 DNA Binding Superfamily AT2G30470 41.379 5.91e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01519 - K09287 pvu:PHAVU_005G086100g 157.918