Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01513 TTTGTTTTGGAGTTAGCCCAAACTGCAGAAGTCAGAGAAGCTGTGGCTGAGAAAGTTGTTAGTGTTGCTGCCCATGAAGTGGTAAATGCTTCTAGTTCTAGGGGAGATAGTGGGGGAGGTTGTGATGTGTATGTCACAACAGTGAAGGGTGAAGACAGAGGAAAGAAAGCAGAATCTGGTGGGAACAAGGTGACTATTATGGTTGGAAATAAAGTAGAAGATGCAGCTATTTTGAGGCTGCAATTTAACATTAAGAGGAAACAGTTAGCTCAACATGATGATGATGAAGAAATTGGATGGTCAGATCAACGAGTTCTTTCCTTTTTAGCTTTTAAGATGAACAAATCTGGGCAAGGAGAGGGCTTAGCCAGTGCTGCTGCAATAAAAATACAAAAAAAGTTTTGGGGTTGGAAGAAGATAAAAGAATTCCTGATCATTCATCAGAGAATATTTAAAATCCAGGCTCATGTAAGTGGTCACCAAGTCAGAAGGCAGTATAGAACAATCATATGGTCCATGGGAATTTTGGAAAAGAAGCAACTCTTAAAAGAGTCAACAATTCTTTTAGATAGACCACCACCCAAACCTCCAGATCTGAATTGGAGGGCAGTAGCCAGCAGGTTCCTTAATATGAAAACAGGATGA 645 0.4031 FVLELAQTAEVREAVAEKVVSVAAHEVVNASSSRGDSGGGCDVYVTTVKGEDRGKKAESGGNKVTIMVGNKVEDAAILRLQFNIKRKQLAQHDDDEEIGWSDQRVLSFLAFKMNKSGQGEGLASAAAIKIQKKFWGWKKIKEFLIIHQRIFKIQAHVSGHQVRRQYRTIIWSMGILEKKQLLKESTILLDRPPPKPPDLNWRAVASRFLNMKTG 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01513 214 Gene3D - 123 170 - -
Vimu1g01513 214 ProSiteProfiles IQ motif profile. 146 174 IPR000048 GO:0005515
Vimu1g01513 214 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 63 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01513 Vimu-Chr1 13557094 13557810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01513 77 178 CAMTA Transcription Factor Family AT5G09410 59.804 2.29e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01513 K21596 - gmx:100818124 135.191