Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01471 AATTTAAAGAGAACGTCCTGTGCAACTGTGCTCACTCTGGCTTACCAAAGTCTTGGCATAGTTTATGGTGACCTCAGTACTTCTCCTCTTTATGTTTACAAGACCACATTTTCAGGGAAATTGAAACTCAAAGAAAATGATGAGGAGATTTTTGGCGTGCTTTCGTTTATCATCTGGACATTTACCATCACTGCTCTCTTCAAATATGTTTTCATTGTGATGTCTGCTGATGACAATGGGGAAGGAGGAACTTTTGCATTATACTCACTTCTCTGCCGGCATGCAAGACTAAGCATTTTACCTAATCAGCAAGCCACCGATGAGAAATTATCTGCTTATACCACACAAGATTCTGAAGACACATGGCTTTCTTCTCATTTGAAGTTGTTCATTGAAAAGCACCCAAGGTTCCAAAAAGGACTGTTGATCTTTGTTCTTCTAGGAACGTGTATGACAATTGGTGATGGTGTGATTACACCTGCAATATCAGATTATGTTGTCATAATCTCATGTGTCATTTTGGTGGTCCTTTTCTCCATTCAACATCATGGGACACATAGAGTTGCTTTCATGTTTGCCCCAGTAGTAGCTGCATGGCTTTTGTGTATAAGTGGTATTGGTATCTACAACATATTCCACTGGAACCGGCAAATATACCGTGCACTTTCTCCATTCTACATGTTGAAGTTCCTCAAAACCACTGGTATTGAAGGTTGGATGTCATTAGGTGGAATTGTAGCTTTCACATGTCTAGTGTATCCCAGCCTGATTTTTGCATACATGGGAGAGGCTGCATTTCTCTCTAAGCATCATCATGCTATTCAGGGCAGCTTCTACAAAGCCATACCAGGCAAGAAATCATTTCCAGAAACAACAAGCTGTCAATGTTATTTATAA 897 0.4002 NLKRTSCATVLTLAYQSLGIVYGDLSTSPLYVYKTTFSGKLKLKENDEEIFGVLSFIIWTFTITALFKYVFIVMSADDNGEGGTFALYSLLCRHARLSILPNQQATDEKLSAYTTQDSEDTWLSSHLKLFIEKHPRFQKGLLIFVLLGTCMTIGDGVITPAISDYVVIISCVILVVLFSIQHHGTHRVAFMFAPVVAAWLLCISGIGIYNIFHWNRQIYRALSPFYMLKFLKTTGIEGWMSLGGIVAFTCLVYPSLIFAYMGEAAFLSKHHHAIQGSFYKAIPGKKSFPETTSCQCYL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01471 298 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 246 286 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu1g01471 298 Pfam K+ potassium transporter 15 246 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01471 Vimu-Chr1 12708186 12710845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01471 1 289 Inorganic Solute Cotransporters AT1G70300 52.959 3.87e-113 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01471 K03549 - gmx:100798458 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01471 1 12708186 12710845 Vimu1g01471 1 12708186 12710845 ECH