Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu1g01442 | ATGGCTGCAGCTTTAGAGTGCTGGTCCAGCCGCGCCACCGCCGCCGCCGACGATGACACGGTGGAGCAGGTTCTCATGCGTACCCATCACAGATCTGAAGGCCCGGCTTCCACCCCTAAAGACCCCTCCTCCATCCCCAACGTCCACAAGAAGTTCCAGAAGCTCACCCGCAACGTCTCCGAAGCCATAGCCTCATTCAGAAATTCTCTAAACCTCGATTCACCTCCTTCTTCCAAAGCTGATGCCTCTTCGCGGAAACTTGCCTGGGGAAGTGTCGTTCGCAACCTCACTCAGCTCTACCCCGGAAGCCAACTCCCCGAGAAACTTATGTCCAACATTCGCAAGCATTATGATTCCTTGCCCCTCAGGTCCCAGAAAATTAATGCCGCCCAAAGTTTTTATCTTTACTCGCAGTTTCGGTTTTTGTGGTGTTCTGGGGAAGTTCTAAATTCTGTACGTTTGGAGGCTTTGATGTGTCTGGAGCTGATCGTGGATGGAAACTTTGACATTGCTGAGTTTGATATGAAGGATGTGTTTCTTCACATAAAGTTGATGGAGCAAGCTTCGGAGACTGACCAGCCTGCTATTTTAATTCAAGAGGATTGTGATGAAGAGGTTCAAGGTTCTGCTCTGAAGCTCACGTTTGCTTGCAACTCTCCGATTTCCTGGCCTGCGATGTCTGGGGCATTGGACAGTTCCTCCATTTGCTGCAAGAGGATGCAGATCTTTGAGAAGAAGGGTTTCACCTTGGGAGTTGTGCTTCTTGTGGTTCTGTCTGGGCATGATAAGTTGGTGAGGACCAGGGTTGAAAATGCTTTGAAGTTTGCAATGAAGAAGCCTAAAACTGGTGCTGTGAAGCTCCCCTTCGGGCTCTGTGGGTGCCAGGAGGAAAATTCCAAAGGGAGAGATCTTGTGGAGATTGAAGAAGAATACGGTGATGGTTACCGTGGAAAGGAGTTTGAGAATTCAAGTCAAAGGATTCAGCTTCAGGTGCCTCTGCCTTCTTCATCTTTCATTGTGTCAGTGGATGAATGGCAGACCATACAGTCAGGTGGGGATGAGATTGAGAAATGGTTGTTGAACTCAGATAGCGTGGAGTTTGTTGAGCAGATTGGGCCAACTTCGTACAAGGGAGTTTATATGGGGAAGAGGGTTGGGATTGAGAAGCTGAAGGGGTGTGATAAAGGGAATTCTTACGAGTTTGAGCTCCACAAGGATCTGCTGGAACTCATGACTTGTGGTCATAGGAACATTCTGCAGTTCTGCGGTATTTGCGTGGATGATAATCATGGGTTGTGTGTGGTGACCAAGTTCATGGAAGGTGGATCTGTTCATGACCTGATGTTGAAGAACAAGAAGCTGCAGAATAAGGATATTGTGAGGATTGCAGTTGATGTGGCAGAAGGGATCAAGTTTATGAATGACCACGGTGTTGCATATAGAGACCTTAATACACAGAGAATTCTGTTGGATAGGCATGGGAATGCTTGCTTGGGAGATATGGGTATAGTCACTGCCTGCAAAAGTGTTGGAGAAGCTATGGAGTATGAAACTGATGGTTATAGGTGGCTAGCTCCTGAGATAATAGCAGGGGACCCAGAGAATGTGACAGAGACATGGATGAGTAATGTGTATAGTTTTGGGATGGTAATTTGGGAGATGGTAACTGGTGAGGCAGCATACTCTTCATTTTCACCTGTTCAAGCAGCAGTGGGCATTGCTGCATGTGGCCTTAGACCAGAAATCCCAAAAGACTGCCAACAAACTCTAAAATACATTATGACAAAATGCTGGAACAACGCCCCTTCCAAACGCCCTCAGTTCTCTGAAATCTTAGCCATATTGCTGCGACCAAACTGCAACAACAGATAA | 1872 | 0.4722 | MAAALECWSSRATAAADDDTVEQVLMRTHHRSEGPASTPKDPSSIPNVHKKFQKLTRNVSEAIASFRNSLNLDSPPSSKADASSRKLAWGSVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPLRSQKINAAQSFYLYSQFRFLWCSGEVLNSVRLEALMCLELIVDGNFDIAEFDMKDVFLHIKLMEQASETDQPAILIQEDCDEEVQGSALKLTFACNSPISWPAMSGALDSSSICCKRMQIFEKKGFTLGVVLLVVLSGHDKLVRTRVENALKFAMKKPKTGAVKLPFGLCGCQEENSKGRDLVEIEEEYGDGYRGKEFENSSQRIQLQVPLPSSSFIVSVDEWQTIQSGGDEIEKWLLNSDSVEFVEQIGPTSYKGVYMGKRVGIEKLKGCDKGNSYEFELHKDLLELMTCGHRNILQFCGICVDDNHGLCVVTKFMEGGSVHDLMLKNKKLQNKDIVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDRHGNACLGDMGIVTACKSVGEAMEYETDGYRWLAPEIIAGDPENVTETWMSNVYSFGMVIWEMVTGEAAYSSFSPVQAAVGIAACGLRPEIPKDCQQTLKYIMTKCWNNAPSKRPQFSEILAILLRPNCNNR | 623 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu1g01442 | 623 | ProSiteProfiles | Protein kinase domain profile. | 365 | 620 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu1g01442 | 623 | PRINTS | Tyrosine kinase catalytic domain signature | 586 | 608 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu1g01442 | 623 | PRINTS | Tyrosine kinase catalytic domain signature | 436 | 449 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu1g01442 | 623 | PRINTS | Tyrosine kinase catalytic domain signature | 542 | 564 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu1g01442 | 623 | PRINTS | Tyrosine kinase catalytic domain signature | 472 | 490 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu1g01442 | 623 | SUPERFAMILY | Protein kinase-like (PK-like) | 343 | 615 | IPR011009 | - | |
Vimu1g01442 | 623 | Gene3D | Transferase(Phosphotransferase) domain 1 | 358 | 618 | - | - | |
Vimu1g01442 | 623 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 132 | 615 | - | - | |
Vimu1g01442 | 623 | Pfam | Protein tyrosine and serine/threonine kinase | 400 | 614 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu1g01442 | 623 | MobiDBLite | consensus disorder prediction | 28 | 47 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu1g01442 | Vimu-Chr1 | 12320710 | 12325019 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu1g01442 | 348 | 615 | MAP Kinase Kinase Kinase | AT2G17700 | 33.455 | 2.78e-51 | 184 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-7 | Vimu1g01442 | PK_Tyr_Ser-Thr | 1.5e-41 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu1g01442 | - | - | pvu:PHAVU_008G258400g | 1087.02 |