Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01362 ATGCTCATCAAAATTTGGAGTTGGCTACATCAGCCAAAGGTATGGAGATTAGTGTGTTTTGCTTCATCTATCGTTGGTCTTATCTGTTATGCTTTGAGCTCCTCTTTCAATCATTTAATTGGAAATTGGAGCTGGTGGAAGTTACTTCTTTACATTGTTTTCGGTTTTTTAATCTCCCTTTCCACCTTGTTTGCAAAGACATGGGAACACTCCAACTCTCGCTGTTTGGAAGCTCACACTGCATTTTCTGCTTTGCTTATGACTTCTGTATACTCCTTTTTCCTTGATAAAGATCTGAAACAGAAAGCAGATGCCTATAGTCTGCTTTCTTGTGTTGCTTTTGCTATCATGTCTCTAGGCTTGTCTAGGCTCAGTCAGTTAGGATTTGAGGTTGATCTCCTGTATTTTTTCTGTGGACTTCTGACCGTACAACTCATGAAAATAAAACTGTGGCTAGTCAGTGTTGGGGGAGCTTTCAGTTATTCCCTAATCCTTCTTCGTTCCAATTTGGATCTTCAAACAGGAAGTGGGTATCATGGATTTCAACACCAAGATCATGTAGTAGTTGAAATTGGTTCTCATTCACAACCACAAGGAACCAGTAATAGTGTTACTTCAACCCAAACAATTATGGCTAGTTCACAACCAGACCCTGTCATCAATATGGTCTGGCCTTCAAGAGGAACAAGGCATAGTGCTTCTCAAGTAGTTTCACCTCAAGAGGGTGGTGCTGGTGGTGCCCCTCCAGAAAATATTTATGGTACCGAGGAATGCTTCATGGGTTGTATAGAGGCTCTTAAGAAGGAGAATGGGAACGTTATCAGAGCAATTTCCATGCATGTAGACAAATACCTTAAAGCTAATGTTCTTAGTGAGGAGCAGATTTCAGTGCCAGAATTGCATGGCGACGACAACATGGTGGTGGATTCATTGTCGTCAGGAATGATCAGCAAGCTTCGTGAAAGTGTAGAGAAGATGGTGTCAGATGGATTTGAGGAGGAATGCTTGCACGTGTACAGTAATTGGCGGAGGGAGTTTCTGAAAGAGAGCCTCTGGGCATTAGGGTTGCAGGATCAAGAGCTCAACGGGGAGGACATTAAAAAGTCGGAGAAGATTGAGAGGCTGATAAAAGCTATGAACATAGCTGTGAGGATACTCTTTCCCAATGAAAAAATACTCTTCAATCGTGTCTTTAGCCGCTCCATTCCGAATGGGGAGTTTCATTTCAGGGAACTTTGCACGGAATTGGCTACTAGTCTGCTGCAATCTGCCCGTGCCTTGGCAACTTGGAGCGCTTTCATGCGCACCACATTGCAGGAGTTGATACAAGACTTTGAATCATTTACAACACCATTAAATATTGTAGTGGTCCTGATAAGGCAGAGATTGTGCATTTATGAAGCTTCGGAAGATGTATCACTCATTCCTGGTGGCGGGATTCATCCTATTACCCTTGAAGGGATGTACTATACTTATTCGGTTTACAGAAATAGGGAAATTAGGAAACTTAGCCAAGATTTAATGGAGGGAAAGATTCCAGCATCTGTGTACGTAGACAAAGTGAGAATTCTGTTAAAGAGTAGTTTGGACGATAAGTCCAAAAATGGTAATAAGCTTGAAGTGATGTACTACATTAAATTTTTACACCAAAGTAGGGAGAATAAAGTTAGACTAGGTTTAGATGAAATGATTTCACCTGTGTGTATTTACAAGATGATAGAGATTGTAGAGAGCAGTTTAGAAGCCAACTCGAAAAAATACAAAAACCCTTCTTTGCGTTATGTTTTCATCATGAACAACCGGCGATTCATTGAAGTAGAGACAAAACTGAATGGACTTGGACTTTCTTTTGGAGATGACTGGCTCCACAAAAACACAATAAAGCTCCAAGAAAACCTTGAGCTCTATCTAAGAAGCTCATGGAATAAGATTCTGGACCTTTTGAAGGTAGACATCAATCAACCAGAGTCTAGAGTTTTAGCCGAGTTGATGAAAGACAACCTTTATTGGTTCAACGAACACTTTGATGAGACATGCAACATTCAGTCTGCGTGGTCTGTCTGTGATGAGGAGCTAAGGGAACAAGTAATAAAATCCATAGAAAACATGCTCTTGCCAGCTTATGGAAGTTTCCTTGGCACATTTGAGGAACTTGTTGGGAAGCATGCTTATAAATACATCAAGTATGGAATGTTTGACGTTCAAGATCGACTCAACAAATTGTTTCTTTTAAGGGAGTAG 2241 0.4079 MLIKIWSWLHQPKVWRLVCFASSIVGLICYALSSSFNHLIGNWSWWKLLLYIVFGFLISLSTLFAKTWEHSNSRCLEAHTAFSALLMTSVYSFFLDKDLKQKADAYSLLSCVAFAIMSLGLSRLSQLGFEVDLLYFFCGLLTVQLMKIKLWLVSVGGAFSYSLILLRSNLDLQTGSGYHGFQHQDHVVVEIGSHSQPQGTSNSVTSTQTIMASSQPDPVINMVWPSRGTRHSASQVVSPQEGGAGGAPPENIYGTEECFMGCIEALKKENGNVIRAISMHVDKYLKANVLSEEQISVPELHGDDNMVVDSLSSGMISKLRESVEKMVSDGFEEECLHVYSNWRREFLKESLWALGLQDQELNGEDIKKSEKIERLIKAMNIAVRILFPNEKILFNRVFSRSIPNGEFHFRELCTELATSLLQSARALATWSAFMRTTLQELIQDFESFTTPLNIVVVLIRQRLCIYEASEDVSLIPGGGIHPITLEGMYYTYSVYRNREIRKLSQDLMEGKIPASVYVDKVRILLKSSLDDKSKNGNKLEVMYYIKFLHQSRENKVRLGLDEMISPVCIYKMIEIVESSLEANSKKYKNPSLRYVFIMNNRRFIEVETKLNGLGLSFGDDWLHKNTIKLQENLELYLRSSWNKILDLLKVDINQPESRVLAELMKDNLYWFNEHFDETCNIQSAWSVCDEELREQVIKSIENMLLPAYGSFLGTFEELVGKHAYKYIKYGMFDVQDRLNKLFLLRE 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01362 746 Gene3D Exocyst complex component Exo70 257 745 - -
Vimu1g01362 746 PANTHER EXOCYST COMPLEX PROTEIN EXO70 214 742 IPR004140 GO:0000145|GO:0006887
Vimu1g01362 746 Pfam Exo70 exocyst complex subunit 469 739 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vimu1g01362 746 SUPERFAMILY Cullin repeat-like 291 742 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01362 Vimu-Chr1 11276723 11278963 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01362 294 742 EXO70 exocyst subunit family AT5G58430 35.744 3.78e-70 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01362 - - vra:106763388 1045.8