Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01360 ATGTCTCTAGGCTTGTCTAGGCTGAGTCAGTTAGGATTTGAGGTTGATCTCATGTATTTCTTTTGTGGACTTCTGACCGTACAACTCATGAAAATAAAACCGTGGTTAGTCACTGTTGGAGGAGCTTTCAGTTATTCCCTCATCATTCTTCGTTCCAATTTGGATCTTCAACCAAGAAGTTGGTATCATGGACTTCAACACCAAGATCATGTAGTGCTTGAAACTGGTTCTCATCCACAACCACAAGGAGCGAGTAATAGTGTTACTCAAGTGGATTCAACCCAAACAATTATGGCTAGTTCACAACCACACCCTGTCATTGATATGGTCTGGCTTTCAAGAGGAACAAGGCAGAGTGGTTCTCAAGTAGTTTCACCTCAAGAGGGTGGTGCTGGTGCCCCTCCAGAAAACATTTATGGTACTGAGGAATGCTTCATGGATTGTATAGAGGCTCTTAAAAAGGAGAATGGGAGCGTTATCAGAGCAATTTCCATGCATGTAGACAAATACCTTAAAGCTAGTGTTCTGAGTGAGGAGCAGAGTTCAGTGCCAGAATTGCATGGCGACGACAACATGGTGGTTGATTCATTGTCGTCAGGAATGATCAGCAAGCTTCGTGAAAGTGTAGAGAAGATGGTGTCAGATGGATTTGAGGAGGAATGCTTGCACGTGTACAGTAATTGGCGGAGGGAGTTTCTGAAAGAGAGTCTCTGGGCATTAGGGATGCAAGATGAAGAGCTCAACGGGGAGGACATTAACAAGTCATTGAAGATTGAGATGCTGATAAAAGCTATGAACATAACTGCGAGGATACTCTTTCCCAATGAAAAAAGACTCTTCATTCGTGTCTTTAGGGGCTCCATTCTCAATGGGGAGTTTCATTTCAGGGAACTTTGCAAGGAATTGGCTACTGGTCTGCTGAACTCTGCCCTTGCCTTGGCAACATGGAGTCTTTTCATGCGCAACACATTGCAGGAGTTGATACATGAGTTTGAATCATTCACAATACTAAGAAATATTGCAGTGGTCCTGATAAGGCAGAGATTGTGCATTTATGAGGCTTTGGAAGATGTATCACTCATTCCTGGTGGCGGGATTCATCCCCTTACCCTTGAAGGGATGTGCTTTATTTATTTGGTTTACAGAAATAGGGAAATTAGGAAACTTGGGCGAGATTTAAAGGGGGGAAAGATTCCAGCATCTGTGTACATAGACAAAGTGAGAATTCGTTTAAAGTGTAGTTTGGACCATAAATCCAAAAATGGTAATAAGTTTCATGTGATGAACTACAATGAATCTCCACACCAAAGTTTCCTTGGCACATTTGAGGAATTTGTTGTGAAGCATGTTTATGAATACATTAAGTATGGAAAGTCTGAGGTTCATGATCGACTCAGCAAATTGTTTCTTTTAACGGAGTAG 1422 0.4198 MSLGLSRLSQLGFEVDLMYFFCGLLTVQLMKIKPWLVTVGGAFSYSLIILRSNLDLQPRSWYHGLQHQDHVVLETGSHPQPQGASNSVTQVDSTQTIMASSQPHPVIDMVWLSRGTRQSGSQVVSPQEGGAGAPPENIYGTEECFMDCIEALKKENGSVIRAISMHVDKYLKASVLSEEQSSVPELHGDDNMVVDSLSSGMISKLRESVEKMVSDGFEEECLHVYSNWRREFLKESLWALGMQDEELNGEDINKSLKIEMLIKAMNITARILFPNEKRLFIRVFRGSILNGEFHFRELCKELATGLLNSALALATWSLFMRNTLQELIHEFESFTILRNIAVVLIRQRLCIYEALEDVSLIPGGGIHPLTLEGMCFIYLVYRNREIRKLGRDLKGGKIPASVYIDKVRIRLKCSLDHKSKNGNKFHVMNYNESPHQSFLGTFEEFVVKHVYEYIKYGKSEVHDRLSKLFLLTE 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01360 473 Gene3D Exocyst complex component Exo70 140 427 - -
Vimu1g01360 473 PANTHER EXOCYST COMPLEX PROTEIN EXO70 141 420 IPR004140 GO:0000145|GO:0006887
Vimu1g01360 473 SUPERFAMILY Cullin repeat-like 176 420 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01360 Vimu-Chr1 11237892 11239313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01360 180 385 EXO70 exocyst subunit family AT5G58430 35.565 2.93e-28 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01360 - - vra:106763387 832.017