Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01355 ATGTCATCATCTGCAATGCATCTTGTGATGCTAATGTATGGTTGCATTGGTGTTGTTGCTGCAAAGAATCTGGTTGAATCTTCAAAATTCTCATCTGTACTTGTTTTTGGAGATTCTACTGTTGATCCTGGTAATAACAATTACCTTCTAACTATTTCTAAGGCTAATTATTTTCCTTATGGCATAGATTTCCCAGGGCATGTAGCAACAGGGAGATTCAGCAACGGAAAATTGGTATCTGATTTTCTTGCTTCTGCCTTGAATATCAAAGACACTGTCCCTCCTTTTCTAAATCCAGACCTAAGTGACCAAGAACTTCTAACAGGAGTTTCTTTTGCCTCGGGAGAATCTGGTATTGATGACTTCACTGCATCTCTCACAAATGTTTTATCGATGGACCAACAGCTTCAATATTTCAAAGCTTACACAATGAAGCTGAAGCAAATCGTAGGAGAAGATCAAGCCATGCAAAGACTTCAAGATGCTCTTGTTCTCATCTCTGTTGGTACTAACGATTTCATTTTGAATTTCCATGACTTCCCCTCGAGAAGACTCATGTTCGTCACCATGGATGCTTACCAAGATTATTTGCTTGATAAGTTTGACGTCATAATTAAGGAGCTGTATGACGAAGGATGTAGGAACATTGGCGTGGCTGGGCTTCCTCCCCTTGGTTGTGTGCCTCTTCAAATGTCCCTAAAATTCAAAATTGATAGGCAGTGTTTGGTGCATCAGAATGATGACAGTGAGAAGTATAATCGGAAGTTGGCTCAGAGACTCTCGCTATTACAAGCTACACTCCCTCAAAGCAAAATTGTATATGGAGATTTGTACCACCCACTGCTCAACCTTTATACTCATCCTCAGCATTATGGTTATTTGGAAGTGATTGAGATATGTAATGCATATACACCTCTATGCAGTAATCACTCAAAGTATGCATTTTGGGACAGTGTTCATTTAACCGAAGCATCTTACAGTTATCTTGCAGACCATCTTATAAGAGTAGCTTTGCCCTTATTCTTCAAATAG 1032 0.3944 MSSSAMHLVMLMYGCIGVVAAKNLVESSKFSSVLVFGDSTVDPGNNNYLLTISKANYFPYGIDFPGHVATGRFSNGKLVSDFLASALNIKDTVPPFLNPDLSDQELLTGVSFASGESGIDDFTASLTNVLSMDQQLQYFKAYTMKLKQIVGEDQAMQRLQDALVLISVGTNDFILNFHDFPSRRLMFVTMDAYQDYLLDKFDVIIKELYDEGCRNIGVAGLPPLGCVPLQMSLKFKIDRQCLVHQNDDSEKYNRKLAQRLSLLQATLPQSKIVYGDLYHPLLNLYTHPQHYGYLEVIEICNAYTPLCSNHSKYAFWDSVHLTEASYSYLADHLIRVALPLFFK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01355 343 PANTHER GDSL ESTERASE/LIPASE EXL3 16 333 - -
Vimu1g01355 343 Pfam GDSL-like Lipase/Acylhydrolase 33 333 IPR001087 GO:0016788
Vimu1g01355 343 Gene3D SGNH hydrolase 19 338 IPR036514 -
Vimu1g01355 343 SUPERFAMILY SGNH hydrolase 33 336 - -
Vimu1g01355 343 CDD SGNH_plant_lipase_like 32 334 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01355 Vimu-Chr1 11207981 11209306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01355 27 335 Pollen Coat Proteome AT1G75910 35.556 1.32e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01355 - - aprc:113874434 397.897