Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01352 ATGTCGATGGCCGGAACCGTGTCCTTAAACACAAGTTTATGGATTTGTGAACCTTCAACAAAGTTTCAAGTTTATCCCAAAGGAATATTCTACGACGACAACCCTTTAAACTACACGCTAACGGTGGTCACTTTACAAGCTTGCTTAGCCTGTTTGTCCACCTCATGCTTGGAATTCCTTCTTATCCCCCTCGGGGAGACTACCTTCATTCCCCAAGTGCTGGAGAAGAGAGCAACGGAGGGCAGACTCGATGGAAGACTGAGTGTGGTGGAGAACAAGCTGGAAGCCATGGAGATAGCGGTCGACGAAATAAAGGCTGAAAACGTAGTACTACGCCAAGATACGATGGCAATACGGCAAGACTTGCAGGAAGTCATGCGGATTTTGGGAGGAAGGGTGCGTGACCAGGAGGGGATATTTGACGGTAGTCAAGGGTCTGTAAATGCCAATCGGAAGGAAGGCGGGAAGACGAGATCGGAGGAAGAGACGGAGAGCGCGGTGAAAATCACGGCGGGTGGCGAAAGGTTTGGATCCGCTAAATTGGATCAATCGCGCGGAAAAAAATTTCAAAGTGCAGGGCGTCTTGGAGGAGGAGAAAGTGATACTGGATCAGGGTTGAAGGATGCGCTGGTAATGAGGTTTGGGGATCGAAACAGAGGGTCGGTCTTGGTGCGATTATCGGCGACTAAACAAATGGGAACAATGGATGAGTTCGTCCCAGATTTCGAGGGTCTCGCGGGGCAGACGAAGAGGTTGCCGGAGGAACAGCTACTAGAGTATTTCCTCACGGGCTTGCAGGAGGATATACAAAATCAAGTTCGAATACAAGATCCCCAAGCACTGGTGGTCGTCATGCGAATCGCCAGGGAAATAGAGGAAGACCACAAGGGAAATAAGGATGGGAGTGTAGGCCGAGGAGGTGCAGTGGCGATGGTTGAATCAAATCGAAACAGTGAAGAAACGGAAAAAAATAGGTGTGCAGAAATGGTGGATGCCAGGAAGAAGATGGCGAGCTGGACGTTGAGTGGAGTGTGGAAGAGAGGAACTTGTTCTCTTGGGATACAAAAATGTGGTGGGAAAGAGGAGTCAAAAGGGAATGAGTTGAATGTTAAGTGCATAAGGGATTATAGGCACAAGGTCGAGAGGGAGCTCTCTAATACTTACAATGCTATTAGGATAATTTTAGATGAGCATCTTATCCCATCCACAAATATCGCAGGATCCACGATGTTTTATTATAAGATGAAAGGAGACTATTACAGGTACTTGGCAGAATTTAAAGCCGGTAATAAAAATATGGAGGTAACAGAGCAGTTACTTAAAGCAAATCACACAGCTGCTACCATTCACCCATATAATGTTGGGGGAGCGATGATGAATGGATTACGAGAGTCTTTTCGCATAATTGACACATTGAGCACGGGAAATGATTATATTGCATCGGAGGAGGATTTGAGGTGTAGAAGGCTAGAAGTTAATAAAATCCAGGAAGAATGTAATGTTAGGGCTTGGAGAGTGTATGAAAGGAGACGGGCAGGATTGCTAACGGGACCAACATTTTTGGGGAAAATTTTAAGCCTTAGTAACTTGTTCGGCCAAAGACCTCTCTATGTAGCTCAGGCAATCTCTCTTTTCGGGATGACAATGTTTTTGTTCTTGATGGGAGTGAAAGTAGATCCACTTTTAGTTTTTAGAACAGGGAAAAAGACTTGGGCCATTGCCTTGTGTTCTTGTCTATTGCCACTCTTCTTTAGCTTATGTCTTGCTTATATTCTAAGGCAATATTTGTCCCCAGAATTAGAAATCTATAAGTATCTATATATTATGGCGGCTTTCTCATCAACTGGTTCCTTTCAAGCCACTGCCAGTGCATTACAAGATTTTAAGCTCCTAAATTCTGAGGTTGGTCGATTAGCAATCTCTTCATCTATGATAAATGGAGCACTCAGTTCGTTATGGCAAGGCATTTTACGCACACTATATCCAAACGCTGTGCAGAAATACACAGACTTATCTTTATCATTGGGTTGCCTCTCTCTGATTTTGATGTTGCTTGTCATCCTGTGTATTTGTCGACCTATCATGTTATGGATGATACGCATGACGCCCAAAGGGGAACCTGTGAAAGAGTCCTACATAGTTTCCATTTATGTTATGGTGTTGGGGTGTTCAATCCTTAGTGAGATCATTGGGCAGCACTACCTGCTTGGACCATTGATTCTTGGCCTAGCAGTGCCAGAAGGTCCACCTCTTGGATCAGCATTGGTAGAGAGGCTAGATACCTTGATCTCGGGACTGCTTTTGCCATTGTTCTTCTTCTCTTCCAGTGCTATGTTCAAGATCGATCTATTTCATCTCTATGACTTCACAGTTGTACAACTTTTGGCCATAGCTAACTTCTTTGCCAAGCTTGCAGGAGCTGTGTTGCCCTCACTCTACTGCAACATACCACTCATTGATGCACTTGCCTTAGGTCTCATCCTCAATTCCCAAGGCATCACACAGTTGCTGAACTTGCAAAGTTTACACTACTTTCAAACTATAGATGATAGATCGTACGCGCAAATGCTGATAGCTTTAATATGGTTGACAGCAGCTTCCAACCCTATAGTGAAATTCTTGTATGACCCATCTAAAAATTACTCGTCTCTAACAAGGTGGAGAACCATTGAGCATTCTCCCCCCTACATTGAACTTCCGATCATTGCATGCATACACTGCGAGGAAAACACTACATCGATGATCAATTTTCTAGAAATATCTAACTCTAGAGTTGAAAGTCCCATTTACTGCCATGTTCTACACCTGCTTAAACTGAAAGGTAGAACAGCCCCACTTTTGATAGATCATGAACTCAAGTGCAGCAGCAATCTATGGCGCACTAATCATTCATTGAACATAATAAATGCCTTTAAATCATATGAGCAACACAGCAGAAGCGTGAAGGTGAAAGTCTACACTAGTGTCTCCCATTATGAGACAATGCACAATGAGATATGCATGCAGGCTGCAGAGAAAAGAGCATGCATATTAATTGCACCTTTTCACAAGCAATTTAGAACAAATGGGGTTATAGAATTAGCAAATCCCATTAGAGCATTGAATCGCAATTTGCTGAGAACCGCACCTTGTTCCGTTGGGATCTTAGTTGAACGTGGGAGTTTGGTTAGCAAGAACCCTCTAACAAGTATATCCTTTTATAATGTTGCAGTTGTATTTATAGAAGGGCCAGATGACCGTGAAGCCTTGGCATATGCAATGCGCATGGCAGATCACCCCAATGTAAAGGTCACTGTAATTAGGATAAGGAAACCTCACAGGAAAAGTATAAGTTCGATCGTGAGAGACCCTGATGCTGAAATAGTTCACAAGTTTATGAGTAACTACCTCCAAATGAAACGACATGATTTCAAACAGCAAATTGTGAAAGATAGTTTTGAAATGGTTGCTGTCATTAGAGAACTCGAAGGTTACTTTGATTTGATTTTGGTTGGTAGACGCCACGAGAGTGAATCTTCAATGTTCTATGGAATGAATGAGTGGATTGAGTACCCAGAACTTGGGTCTGTAGCAGACATGTTAGTGTCTTCAGATTCTACCTTTGACGGCTCAGTTTTGGTGGTGCAACAACAAAATAAGGAAGGGTCAAAGGTTGATTCTCAAGATTATTACAATATAGAAAATTCTGTCACCAATGGTGAATTACCAAATGTTTTGGATGTGCATCCTCATACAAAGGTGTGGTCAACTGTCTAA 3756 0.431 MSMAGTVSLNTSLWICEPSTKFQVYPKGIFYDDNPLNYTLTVVTLQACLACLSTSCLEFLLIPLGETTFIPQVLEKRATEGRLDGRLSVVENKLEAMEIAVDEIKAENVVLRQDTMAIRQDLQEVMRILGGRVRDQEGIFDGSQGSVNANRKEGGKTRSEEETESAVKITAGGERFGSAKLDQSRGKKFQSAGRLGGGESDTGSGLKDALVMRFGDRNRGSVLVRLSATKQMGTMDEFVPDFEGLAGQTKRLPEEQLLEYFLTGLQEDIQNQVRIQDPQALVVVMRIAREIEEDHKGNKDGSVGRGGAVAMVESNRNSEETEKNRCAEMVDARKKMASWTLSGVWKRGTCSLGIQKCGGKEESKGNELNVKCIRDYRHKVERELSNTYNAIRIILDEHLIPSTNIAGSTMFYYKMKGDYYRYLAEFKAGNKNMEVTEQLLKANHTAATIHPYNVGGAMMNGLRESFRIIDTLSTGNDYIASEEDLRCRRLEVNKIQEECNVRAWRVYERRRAGLLTGPTFLGKILSLSNLFGQRPLYVAQAISLFGMTMFLFLMGVKVDPLLVFRTGKKTWAIALCSCLLPLFFSLCLAYILRQYLSPELEIYKYLYIMAAFSSTGSFQATASALQDFKLLNSEVGRLAISSSMINGALSSLWQGILRTLYPNAVQKYTDLSLSLGCLSLILMLLVILCICRPIMLWMIRMTPKGEPVKESYIVSIYVMVLGCSILSEIIGQHYLLGPLILGLAVPEGPPLGSALVERLDTLISGLLLPLFFFSSSAMFKIDLFHLYDFTVVQLLAIANFFAKLAGAVLPSLYCNIPLIDALALGLILNSQGITQLLNLQSLHYFQTIDDRSYAQMLIALIWLTAASNPIVKFLYDPSKNYSSLTRWRTIEHSPPYIELPIIACIHCEENTTSMINFLEISNSRVESPIYCHVLHLLKLKGRTAPLLIDHELKCSSNLWRTNHSLNIINAFKSYEQHSRSVKVKVYTSVSHYETMHNEICMQAAEKRACILIAPFHKQFRTNGVIELANPIRALNRNLLRTAPCSVGILVERGSLVSKNPLTSISFYNVAVVFIEGPDDREALAYAMRMADHPNVKVTVIRIRKPHRKSISSIVRDPDAEIVHKFMSNYLQMKRHDFKQQIVKDSFEMVAVIRELEGYFDLILVGRRHESESSMFYGMNEWIEYPELGSVADMLVSSDSTFDGSVLVVQQQNKEGSKVDSQDYYNIENSVTNGELPNVLDVHPHTKVWSTV 1251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01352 1251 Gene3D - 315 454 IPR036815 -
Vimu1g01352 1251 MobiDBLite consensus disorder prediction 139 166 - -
Vimu1g01352 1251 Pfam 14-3-3 protein 359 449 IPR023410 -
Vimu1g01352 1251 Gene3D - 963 1208 - -
Vimu1g01352 1251 SMART 1433_4 305 500 IPR023410 -
Vimu1g01352 1251 SUPERFAMILY 14-3-3 protein 357 449 IPR036815 -
Vimu1g01352 1251 PANTHER CATION/H + ANTIPORTER 511 1212 - -
Vimu1g01352 1251 Pfam Sodium/hydrogen exchanger family 508 866 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu1g01352 1251 Gene3D - 511 882 IPR038770 -
Vimu1g01352 1251 MobiDBLite consensus disorder prediction 180 202 - -
Vimu1g01352 1251 Coils Coil 87 114 - -
Vimu1g01352 1251 PRINTS 14-3-3 protein zeta signature 376 400 IPR000308 -
Vimu1g01352 1251 PRINTS 14-3-3 protein zeta signature 407 429 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01352 Vimu-Chr1 11129659 11135385 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01352 502 1233 Antiporter Super Family AT2G13620 33.464 8.00e-128 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01352 K26731 - gmx:100790969 918.302