Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01347 ATGGAAAAGCAGAATGCATGTAGTGAAAAATTGGAGTTGGATGTTAATACTTATAATTTGGCAGGGTTGCTAACGGGAACATCATTTTTGGGGAAAGCTTCAAACCTTAAAAAGTTGTTCTCCGCAAGATCTATCTACGTAGTTGACGCAATCTCTCGTTTCGGGGTGATGATATTTCTGTTCTTGATGGGAGTGAAAGTAGATCCACTTTTAGTTTTTAGAACAGGGAAAAAGACTTGGGCCATTGGCTTGTGTTCTTGTGTATTCCCACTCCTTTTTAGCGTAGGTGCAGCTTATATTCTAAGGCAATATTTGTCTCCGGATTTAAAAGTCTACAAGTCCCTATATTTTATTGCGGCTTTCTCATCAACTGGTTCCTTTCAAGCCACTGCCAGTGCATTGCAAGATTTTAAGCTCCTAAATTCCGAGGTTGGTCGATTAGCAATCTCTTCATCTATGATAAATGGAGGGTTCAGTGCGTTGTGGCAAGGCATCGTATTCTCGCACCGAACAAAATCTATGCAAAAATACACAGCAAAACATATTTCATTCGGTAGCCTCTGTCTGATTGCACTGGTGCTTGTCATCCTGTGTATTTGTCGACCTATCATGTTATGGATGATACGCATGACACCCAAAGGGAAACCCGTGAAAGAGTCCTATATAGTTTCCATCTATGTCATGGTGTTGGGGTGTTCATTCTTTGGTGAGGTCATTGGGGAGCACTACATTGTTGGACCATTGATTCTTGGCCTAGCAGTGCCAGAAGGTCCACCTCTTGGATCAGCATTGGTAGAGAGGCTAGATACCTTGATCTCGGGACTACTTTTGCCGTTGTTCTTCTTAACTTCCAGTAATAGATTCAACAGCGATCTAATTTCTTTCGATGACTTCATAGTTGTACAATTTGTGGCCTTAGGTAACTTCTTTGCCAAGCTTGCAGGAGTCATGTTGCCCTCACTCTATTGCAAGATGCCACTCACTGATGCACTCGCCTTAGCTCTCATCCTTTGTGTCCAAGGCTTTACACAGTTGATTATAGATGATACAGCGTACACGCAAATGCTGATAGCTTTAATATGGTTGACAGCAGCTTCCAGCCCTATAGTGAAATTCTTGTATGACCCATCTAAAAGTTACTTGTATCTAACAAGGTGGAGAACCATTGAGCATTCTCCTCCCGACATTGAACTTCCGATCATTGCATGCATACACTGTGAGGAAAACACTCCATCCATGATCAATTTTCTAGAAATATCTAACTCTAGAGTTGATAGTCCCATTTACTTCCATGTTCTACACCTACTTCAACTGAAAGGTAGATCAGCCCCACTTTTGATAGATCATGAACCCAAGCGCCGCAGCAGCAATCTATCGCGCTCTAATCATTCAGTGAACATAATAAATGCCTTTAAATCATATGAGACACACAGCAGAAGCGTGAATGTGAAAGTCTACACATGTATCTCCCCTTATGAGACAATGCACGATGAGATATGCATGCAGGCTGCAGAGAAAAGAGCATGCATATTAATTGCACCTTTTCACAAGCAATTTAGAACAAATGGGGTTATAGAATTAGCAAGCCCCATTAGAGCATTGAATCGCCATTTGCTGAGAACCGCACCTTGTTCCGTTGGGATCTTAGTTGAACGTGGGAGTTTTGTTAGCAACAACCCTCTAACAACTACATCCTTTTATAATGTTGCAGTTGTATTTATAGAAGGGCCAGATGACCGTGAAGCATTGGCATATGCAATGCGCATAGCAGATCACCCCAATGTAAGTGTCACTGTAATTAGGATAACGGAACCTCGCAGGAGAAGTAGAACTTCGATCATAAGAGACCCTGATGCTGAAATAGTTCACAAGTTTATGATCAACTACCTCCAAATGAAACGACATGATTTCAAAGAGCAAGTTGTGAGAGATAGTCTTGAAATGGTTGGTGTGATTAGAACACTTGAAGGTTGCTTTGATTTGATTTTGGTGGGTAGACGCCACGAGAGTGAGTCTTCAATGTTCTATGGAATGAATGATTGGATGGTGTACCCAGAACTTGGGTCTGTAGCAGACATGTTAGTGTCTTCAGATTCTACCTTTCACGGCTCAGTTTTGGTGGTGCAGCAACAAAATAAGGTAGGGGGAATGGTTGGTCGTCAAGATTATTACAATTCAGAACATTTTTTCAGCAGGAGTGAACTACCCACCGTTTTGAACGTGCAGCCCGAAACAACGGCGTGGCATGTTATTTAA 2256 0.4184 MEKQNACSEKLELDVNTYNLAGLLTGTSFLGKASNLKKLFSARSIYVVDAISRFGVMIFLFLMGVKVDPLLVFRTGKKTWAIGLCSCVFPLLFSVGAAYILRQYLSPDLKVYKSLYFIAAFSSTGSFQATASALQDFKLLNSEVGRLAISSSMINGGFSALWQGIVFSHRTKSMQKYTAKHISFGSLCLIALVLVILCICRPIMLWMIRMTPKGKPVKESYIVSIYVMVLGCSFFGEVIGEHYIVGPLILGLAVPEGPPLGSALVERLDTLISGLLLPLFFLTSSNRFNSDLISFDDFIVVQFVALGNFFAKLAGVMLPSLYCKMPLTDALALALILCVQGFTQLIIDDTAYTQMLIALIWLTAASSPIVKFLYDPSKSYLYLTRWRTIEHSPPDIELPIIACIHCEENTPSMINFLEISNSRVDSPIYFHVLHLLQLKGRSAPLLIDHEPKRRSSNLSRSNHSVNIINAFKSYETHSRSVNVKVYTCISPYETMHDEICMQAAEKRACILIAPFHKQFRTNGVIELASPIRALNRHLLRTAPCSVGILVERGSFVSNNPLTTTSFYNVAVVFIEGPDDREALAYAMRIADHPNVSVTVIRITEPRRRSRTSIIRDPDAEIVHKFMINYLQMKRHDFKEQVVRDSLEMVGVIRTLEGCFDLILVGRRHESESSMFYGMNDWMVYPELGSVADMLVSSDSTFHGSVLVVQQQNKVGGMVGRQDYYNSEHFFSRSELPTVLNVQPETTAWHVI 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01347 751 PANTHER CATION/H + ANTIPORTER 19 712 - -
Vimu1g01347 751 CDD USP_Like 568 708 - -
Vimu1g01347 751 Gene3D - 430 708 - -
Vimu1g01347 751 Gene3D - 14 379 IPR038770 -
Vimu1g01347 751 Pfam Sodium/hydrogen exchanger family 18 346 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01347 Vimu-Chr1 11074082 11076648 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01347 20 710 Antiporter Super Family AT2G13620 34.699 4.97e-135 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01347 K26731 - gmx:100790969 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01347 1 11074082 11076648 Vimu1g01347 1 11074082 11076648 ECH