Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01327 ATGAGAAAACAGTGCATATTACATGACTGGAACGATGAGGAGTGTGTGAGAATATTGAAGAAATGCAAGGAAGCTATATCTAAGAAAGGGAAAGAAGGAAAGGTGATAATCATAGACATGGTGATGGATAATGAAGTGAAAGATGAAGAATATGTTGAAACACAGTTGTTCTTTGACATGTTGATGATGGTGTTGGTGAAGGGAAAAGAGAGAAATGAGAAGGAATGGGTTAGGTTGTTTTCCTCTGTTGGTTTTAATAACTACACAATAACTCCCGTTTTGGGCTCAAGGTCTCTCATTCAGATCTTTTCATAG 315 0.3714 MRKQCILHDWNDEECVRILKKCKEAISKKGKEGKVIIIDMVMDNEVKDEEYVETQLFFDMLMMVLVKGKERNEKEWVRLFSSVGFNNYTITPVLGSRSLIQIFS 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01327 104 Gene3D Vaccinia Virus protein VP39 4 103 IPR029063 -
Vimu1g01327 104 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 104 IPR016461 GO:0008168
Vimu1g01327 104 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 5 100 IPR029063 -
Vimu1g01327 104 PANTHER O-METHYLTRANSFERASE 4 87 IPR016461 GO:0008168
Vimu1g01327 104 Pfam O-methyltransferase domain 5 86 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01327 Vimu-Chr1 10765706 10766020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01327 6 85 Monolignol Biosynthesis Gene Families AT1G51990 43.902 8.88e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01327 - K16040 vra:106764465 183.341