Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01323 ATGACGCATGGGAAATCGCTTTGGGAGTATGCTGGCGGTGATCCCAGAATTAACGTCTTATTCAATGATGCCATGGCAAGTGATGCTCAACTAATCTCTAGTTCGGTGATTGAGAAATGTAAAGGGGTGTTCATGGGATTGGAGTCATTGGTTGATGTTGGTGGAGGTACAGGAACCATGGGAAAGACCATTGCCGAATCCTTACCTCAGTTGGAATGCATTGTATTTGATCTTCCACATGTTGTTTCTGGCATGCAAGGAAGTGAAAACCTTAAATATGTTGGAGGGGACATGTTTGAGGCGATTCCTCCAACAGATGCCATTTTGTTGAAGTGGATATTACATGACTGGAACGATGAGGAGTGTGTGAACATATTGAAGAAATGCAAGGAAGCTATATCTAAGAAAGGCAAAGAAGGGAAAGTGATAATCATAGACATGGTGATGGATAATAAAGTGAAAGATGAAGAATATGTTGAAACACAGCTTTTCTTTGACATGTTGATGATGGTGATGGTCACGGGAAAAGAGAGAAACGAGAAGGAATGGGTTAAGTTGTTTTCCTCTGCTGGTTTCAATAACTACAAAATAACTCCCGTTTTGGGCTCAAGGTCTCTCATTCAGATCTCTCCATAG 636 0.4135 MTHGKSLWEYAGGDPRINVLFNDAMASDAQLISSSVIEKCKGVFMGLESLVDVGGGTGTMGKTIAESLPQLECIVFDLPHVVSGMQGSENLKYVGGDMFEAIPPTDAILLKWILHDWNDEECVNILKKCKEAISKKGKEGKVIIIDMVMDNKVKDEEYVETQLFFDMLMMVMVTGKERNEKEWVKLFSSAGFNNYKITPVLGSRSLIQISP 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01323 211 Gene3D Vaccinia Virus protein VP39 1 211 IPR029063 -
Vimu1g01323 211 PANTHER O-METHYLTRANSFERASE 2 196 IPR016461 GO:0008168
Vimu1g01323 211 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 207 IPR029063 -
Vimu1g01323 211 FunFam O-methyltransferase ZRP4 1 211 - -
Vimu1g01323 211 Pfam O-methyltransferase domain 2 193 IPR001077 GO:0008171
Vimu1g01323 211 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 211 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01323 Vimu-Chr1 10727427 10728579 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01323 2 197 Monolignol Biosynthesis Gene Families AT5G54160 40.102 2.35e-45 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01323 - K16040 gmx:100807238 356.295