Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01314 ATGATAGAAGATGTGGCATACCATGGTGTTGGCTTGTTATATATGTTAGATATGGATGAGGATCACAAGATGGAGTTGATCTTACTATGCCTTGAAGAACGTGGTATCTTATCTGCAATTAGTGTCTATGGTGGTCTCCAAAGGCGGCGTAAAACCTCTCTGATACTGAATGCATCGAGGTACATACGTAGTTTGAAGCAAAAGTTGCAGGAATTGAACCAATTAGCAGTTGCAGCAGCACAAAATGTCATCGACAACAATCCAACGCCTGTGATTAAAGTGGAAACTCAAGAAGAGGGGTTTACGATCAAGGTGGTGTGTGAAAAAAGTTGCCAGGGATTGTTGACGTTCATCTTGGAAGCTTTTGAAAAGCTTGGGCTTGATGTTCTTCAGGCTAGGGCTTCTTGTGTGGAGAGGTTCTCTCTAGAAGCTTTTGGAATCAAAGTGAACAAGGCCTCTCAAGTGGATGCACAAATGATTGAGGAAAAGGTGTCTCAAGCTATAAAAAACTGGAGGGAAGTCACAAAGCAATGTTGA 537 0.4209 MIEDVAYHGVGLLYMLDMDEDHKMELILLCLEERGILSAISVYGGLQRRRKTSLILNASRYIRSLKQKLQELNQLAVAAAQNVIDNNPTPVIKVETQEEGFTIKVVCEKSCQGLLTFILEAFEKLGLDVLQARASCVERFSLEAFGIKVNKASQVDAQMIEEKVSQAIKNWREVTKQC 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01314 178 Coils Coil 55 82 - -
Vimu1g01314 178 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 50 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01314 Vimu-Chr1 10615108 10616727 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01314 - - gmx:100809200 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02081 2 15474329 15475504 Vimu1g01314 1 10615108 10616727 PCT