Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01302 ATGGGTTTTCTCCTGGCCGCCAATGGCCTTGTGGTTCTTTACATTACCATCAACTTGTTTAAGATCTATTATGGTGATGATTGGGGTGGTCTTTTTGAGGCCACAACTGGTTATGGTCTGAGTAGGTTTTCTATAGCTTTGTTTGGAAGAGTTGGCGGAGGTATTTATACCAAGGTTGCTGATGTTGATGCTGATCTCGTTGGCGAGGTTGAGAGAAACATTCCAGAAGATGATCCAAGAAATCCAGCTGCTGAAAAGGTTGGTGACAATGTCGGAGATATAGCTGGTATGGGATATGATCTGTTTGGTTCATATGCGGAGTCATCTTGTGCTACTCTCGTTGTTGCTTCCATCTCCTTATTTGGGTTGAATCATGAGTTCACTGCGATCCTATATTCCATCTTCATTTGGGCTTAA 417 0.4293 MGFLLAANGLVVLYITINLFKIYYGDDWGGLFEATTGYGLSRFSIALFGRVGGGIYTKVADVDADLVGEVERNIPEDDPRNPAAEKVGDNVGDIAGMGYDLFGSYAESSCATLVVASISLFGLNHEFTAILYSIFIWA 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01302 138 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 136 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vimu1g01302 138 Pfam Inorganic H+ pyrophosphatase 1 134 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01302 Vimu-Chr1 10476421 10476837 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01302 1 136 Primary Pumps ATPases AT1G15690 79.710 1.30e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01302 K23025 - qsa:O6P43_023964 231.106