Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01225 ATGAGCGTTGTTCCAGTGTTTTCTAGAAGTGTGGAGATCTTATTGGACTGGACTGGGCACGAAGATCCGATCCAATTCCAAACCCAATACGAGATTGAGAAGATGGGGAAACAGATTGTGCCGGTGAAATCGGTGATATATGCTCTCTCCCCTTTCCAGCAGAAGGTGATGACGGGTCTCTGGAAGGACTTGCCCACCAAGATTCATCACAAGGTCTCCGAGAATTGGATCAGCGCCACACTCTTGCTCGGTCCCCTCGTCGGCACCTACGCGCTTGGGGATTTGAAGAGAATTATTAACTTGAGCAGAACAAATAATATGTTGCCTGGATCACCAGCTAAGTCCCCGACAGGACCCCGTGAAAAATTTGGTATCGGAGTAGAGATAGCCCTAAGACTAGACACCCTTGAAAGGGGCATAAAACTCCTTCTGGTATGTTCAGAACTACCTGGAAAAGGAGAAGCTTCATCACAGGTACTGAGTTCTTGCAAGAGCTGA 498 0.4799 MSVVPVFSRSVEILLDWTGHEDPIQFQTQYEIEKMGKQIVPVKSVIYALSPFQQKVMTGLWKDLPTKIHHKVSENWISATLLLGPLVGTYALGDLKRIINLSRTNNMLPGSPAKSPTGPREKFGIGVEIALRLDTLERGIKLLLVCSELPGKGEASSQVLSSCKS 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01225 165 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT 8 35 91 IPR020101 GO:0005750|GO:0070469
Vimu1g01225 165 Gene3D - 34 105 IPR036642 GO:0005750|GO:0006122
Vimu1g01225 165 Pfam Cytochrome b-c1 complex subunit 8 35 91 IPR020101 GO:0005750|GO:0070469
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01225 35 90 Chloroplast and Mitochondria Gene Families AT3G10860 82.143 2.56e-29 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01225 - - gmx:100779432 116.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01225 1 9586506 9588962 Vimu1g01225 1 9586506 9588962 ECH