Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01137 GTGGTGGTAGTAGCAAGGAGGCCAGATATGGCCTTGACATTGCGCATGACGTCGACGACCATGTGTGACGAAGAGCCACACAGCCAGGATAGGGCAACAGAGGCTCCGGTCGAGGTCCTTATTGCATGCGCCATGCGCACACGCTTTTGGCGCAACCCTATCTTCGAGAAGATTCCTGCGAAACTAGCAAAAAATGAAACCCTTGATGATTATCTCAAGGTTCATGGCGTTGTCGCAACCGTTGTCGGCGTCAACAATGATAGAAAAGGAGACGGCTTGGGCGATGAGTTGATGATTGACAGAGGAAACGCAGGCGTCGAGGCCGTTCTCGAGGAGTTCTTTGACGACAGAAACAGGACGTTGAGTGACCTCGCCGATGGTTACTCGGATGAAGAAGTGACAGAACGAAGAATCCACAAACCAAGGTGGCTTGAGTCTTTTCTGAGAAAAATTTTCTTTAACTCCTGCTCAACTCATCCATTCCGTAAGAATGAGTTGAACAAGTATTGTATAAACTGCAATTTGTCAGTTTGCCAATACTGTGTAGCTTCGGGTCCTCATCGCCATCACAAAATACTGAAAGTCTATAGACATGTTTATAAGGATGTTGTCTCTCTTGCAACCATGGAAAAGTATATTGATATCTCACAAATTCAGCCTTACAAATCCAACAAGCGACTGGTTATTTCACTGAATCCTCTACCACATTCTGGTTCAACAGCAAACAATGAGGCATCATGCAATACTTGCAAAAGAAAATTGACTGAACCTGATCTATATCGCTATTGCTCCATTTCTTGCAAGGTTAGAGCTGTTTTAAGTAACCCTGATGATTCGACTCCTCCTTTCATTTCCATCCAGACTCCTCGTCTTCCTCCTCAGCAGGAAAAGCAGGAGGAAACTAAATCTGAACCTCAAAAGACACAAAAGAGGAAAAGAAAGGGATCACCCCATAGAGCTCCCTTCTTCTGA 972 0.4506 VVVVARRPDMALTLRMTSTTMCDEEPHSQDRATEAPVEVLIACAMRTRFWRNPIFEKIPAKLAKNETLDDYLKVHGVVATVVGVNNDRKGDGLGDELMIDRGNAGVEAVLEEFFDDRNRTLSDLADGYSDEEVTERRIHKPRWLESFLRKIFFNSCSTHPFRKNELNKYCINCNLSVCQYCVASGPHRHHKILKVYRHVYKDVVSLATMEKYIDISQIQPYKSNKRLVISLNPLPHSGSTANNEASCNTCKRKLTEPDLYRYCSISCKVRAVLSNPDDSTPPFISIQTPRLPPQQEKQEETKSEPQKTQKRKRKGSPHRAPFF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01137 323 MobiDBLite consensus disorder prediction 278 294 - -
Vimu1g01137 323 CDD Bbox2 156 195 - -
Vimu1g01137 323 MobiDBLite consensus disorder prediction 278 323 - -
Vimu1g01137 323 SUPERFAMILY B-box zinc-binding domain 153 195 - -
Vimu1g01137 323 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 136 322 - -
Vimu1g01137 323 Gene3D Classic Zinc Finger 152 213 - -
Vimu1g01137 323 MobiDBLite consensus disorder prediction 308 323 - -
Vimu1g01137 323 ProSiteProfiles Zinc finger B-box type profile. 156 195 IPR000315 GO:0008270
Vimu1g01137 323 Pfam PLATZ transcription factor 197 269 IPR006734 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vimu1g01137 PLATZ 2.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01137 - - qsa:O6P43_014262 278.87