Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01132 ATGGATTCTCCGGTCAAGAAGAAGCCATTGTCTCGTGTTAGCTTAAGTTTTAAGAAGAAAGGGAAGTACCCTGTATTCCCCCTAGTGAGGTATAATGAACTTCGGCAGCCTGTTTGCCAGGTATGTGGTGTGGTTATGTTGGAGCCTATACGTTCACACCTGGCTTCTCCTGAGCATCACGAGGAAATGAAAAAATGGAATACTAATACTACTGCATCGGCTGACCATAACAATGCAAAGCCACTTACTGGTACCAACTCTCCCAAGGCTAATAGAGAACAACCTCAAGATACAGAACACCAACTGCCAGAATGTTCACAAAATGTGCCTCAACATCAGTCACCGTCGACGCTTCCAAGAGATTTTTGTGATGACAGTGGTAAAATAAGGACTAGATCTGTTTCAAAAGTAACCGAAACGATGGACCCTCCTAAAGATCAAGAATACGGGGAATCCAACAACGGCTCTGTAAAGATGAAATCCAAGATTTCACCTTCCATCCATGAACCATTGACATCTTCAAGACGTGGAAGACCACGAAAAACGAAGCCTACCAAGTTCATAATCAACCAGACACCCAATCCCCCATCAACACCCCGGAGATCCAAAAGAATAAAGCATGTGGCTGATAGAACTGCCGACAATGTGCCTGAAGCATCGTCATCTGAGGAATTATTGAAGGTAAAACTAATTGCATTACTGAAGAGGCGGACTGCAGAGAGTTCCCTAGTCAATGGCAAAGAGAGTTCCCAAGTAGATGGCAAAGAGAGTTTCCCATTAGATGACAAAGAAGCCTCTCCGGAAATCGACCCCTTAATCTACAAAAGAAAAAGACTACCTCGGAAGCGGTATTATGGTCAAACGAGCAAGACTACAAAGAAAACTGCTCCCAGAAAGGTTCCAACTGCTGCAATTACTAGCTCTACTGCTGGTTTACCCCCTCATCACGATCCTCCTGCAGCTGCTCCAGTCAATGTTGATGCTCCTCACGTTGAAAATACAAATACTGCTGAGCCAATATTCAGTGAAAGACTTGTCGAAGAGGTGGAGAAGGTTAACCCTGCCCCAGCCAATGCACAAGAGCAGGTTGCTTCCCGCAAGGCTGAAGATTCTCAACCAGATCAAGTGGACCCAAAGGCTGATGAAGTCTCTTCTGGAAACACCCCACTCGATGTAGAAGCCATAGACAAAATGATCGAAGATGACCCTTTGAGTGCCATTGAAAATATCCTGACGGGGAAGGTTTCCATTTCTTCCAAAACTCCACAATCTGCTACTCTGTCAGAACCACCAGAAGCTCAAAGCTCCCCTACAGATATTCTGTCAAAAGAGCTAAAAGACTTGATGCAGACGTTCAGCTTAGGTGATTTTGTTACAGACTATGAGCAATTATCAAAAGTCCTACTTATTCTTGAAGAGTTGCAGAAGAATGAGAATTTACTTTCTCTTGCCCAGCAAACATTCATGAGGACATTCAGACTGTTCTTCAACAGTGCTATTGCTCACCATAAAGAATCTTGTACAGTTGGAATAAAGAAAGTCAAGTTGAACCGGGCTAAAGAAAATATCCTTCACAAACTGCAAGAAACTAAACATGCACAAGAGCAAATCACAACGTCCATTTCAATTGCCAACATCAGGGTCAATGAAATATCTTCTTCTATTGAACAACTTGAAGAACAATTATCTAAACTTAAGGAAGAGAGAGAGACCTTTCAGTTGGCTATAAATGAAGGCGAGAAACAAAGGGAGACATTGAAGAATGATAGCATCTTATGGGCTCACCAGACAAAAGACCTGGTTTTTGATCTTGCAGGCATTGAGGCAAAAGAAAAAGCCCTTCGACAGCAACTTGAAGCAGACAAAGATGCATATAACCAATTTAAGGCATCCTTTCCTTTTTAA 1905 0.4273 MDSPVKKKPLSRVSLSFKKKGKYPVFPLVRYNELRQPVCQVCGVVMLEPIRSHLASPEHHEEMKKWNTNTTASADHNNAKPLTGTNSPKANREQPQDTEHQLPECSQNVPQHQSPSTLPRDFCDDSGKIRTRSVSKVTETMDPPKDQEYGESNNGSVKMKSKISPSIHEPLTSSRRGRPRKTKPTKFIINQTPNPPSTPRRSKRIKHVADRTADNVPEASSSEELLKVKLIALLKRRTAESSLVNGKESSQVDGKESFPLDDKEASPEIDPLIYKRKRLPRKRYYGQTSKTTKKTAPRKVPTAAITSSTAGLPPHHDPPAAAPVNVDAPHVENTNTAEPIFSERLVEEVEKVNPAPANAQEQVASRKAEDSQPDQVDPKADEVSSGNTPLDVEAIDKMIEDDPLSAIENILTGKVSISSKTPQSATLSEPPEAQSSPTDILSKELKDLMQTFSLGDFVTDYEQLSKVLLILEELQKNENLLSLAQQTFMRTFRLFFNSAIAHHKESCTVGIKKVKLNRAKENILHKLQETKHAQEQITTSISIANIRVNEISSSIEQLEEQLSKLKEERETFQLAINEGEKQRETLKNDSILWAHQTKDLVFDLAGIEAKEKALRQQLEADKDAYNQFKASFPF 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01132 634 Coils Coil 541 589 - -
Vimu1g01132 634 PANTHER UNCHARACTERIZED 1 633 IPR040050 GO:0003676|GO:0005681|GO:0008270
Vimu1g01132 634 MobiDBLite consensus disorder prediction 147 171 - -
Vimu1g01132 634 Coils Coil 604 624 - -
Vimu1g01132 634 MobiDBLite consensus disorder prediction 70 92 - -
Vimu1g01132 634 MobiDBLite consensus disorder prediction 185 199 - -
Vimu1g01132 634 MobiDBLite consensus disorder prediction 354 389 - -
Vimu1g01132 634 MobiDBLite consensus disorder prediction 100 120 - -
Vimu1g01132 634 MobiDBLite consensus disorder prediction 285 326 - -
Vimu1g01132 634 MobiDBLite consensus disorder prediction 418 438 - -
Vimu1g01132 634 MobiDBLite consensus disorder prediction 70 204 - -
Vimu1g01132 634 MobiDBLite consensus disorder prediction 239 265 - -
Vimu1g01132 634 MobiDBLite consensus disorder prediction 289 309 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01132 1 63 C2H2 Transcription Factor Family AT3G02860 47.692 4.84e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01132 - K13104 vun:114194212 1061.98