Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00980 ATGTTTAATTCCTCTTTATTTTATTTTAATTTATCTTGTTCATACTCTAACCTAATACAGATTTACATAGTCTACATGGGCGAATATCCCAAGGGCATGGAATTCACTGGATCACTTCACACTAATATGGTTCAAAGTGTCATCAGCAGCTACAAGAGTTTCAATGGATTTGTGGTGAGGCTAACAAAAGAAGAATCAGAAAGAATGAAAGGTAATTTTAATATGATTGAATGGATGATGTGGTTTCTGTTATTCCAAATAGAGTCTACAGTGTCGAAACATCAAGGTCCTGGAACTTCCTTGGCTTCCCTGAAAATGTCCAAAGGTCAAAGTGGAATTTGGCCTAATTCCTCTAGCTTCACCAATGGAGGCTTTGGTCGACCACCACAGAAATGGAAGGGAACATGCCATAACTTCACTTGCAATAAGTAA 432 0.375 MFNSSLFYFNLSCSYSNLIQIYIVYMGEYPKGMEFTGSLHTNMVQSVISSYKSFNGFVVRLTKEESERMKGNFNMIEWMMWFLLFQIESTVSKHQGPGTSLASLKMSKGQSGIWPNSSSFTNGGFGRPPQKWKGTCHNFTCNK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00980 143 Gene3D Peptidase S8/S53 domain 111 143 IPR036852 GO:0004252|GO:0006508
Vimu1g00980 143 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 143 IPR045051 -
Vimu1g00980 143 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 80 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00980 Vimu-Chr1 7060068 7060802 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00980 20 142 Subtilisin-like Serine Gene Family AT5G59130 38.926 1.32e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00980 - - vum:124828449 143.665