Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00967 ATGAATTTCAACTCCTTTAATATGATATATCATTTTTCTCCGCACAGACTTACATTGTCTACATGGGTGATCACCCTAAGGGCATGGACCTTACTTCCGTACCTTCTCTTCATACCACCATGGCTCAAAATGTCCTTGGCAGTTATATTGATTTTGTTGGTTATATACGGAAAAATTAACTATGAAAACGTGCTTGCTTCCAGCGATTTCAAACCCGAAGCTGTAATCCACAGCTACAAGAACTTTAATGCGTTCGTCATGAAGTTAACAGAAGAGGAGGCTAAAAGAATGGCAGAAATGGAAAACGTTGTCTCTGTTTTCCCAAACGGCAAGAATCGTCTTCACACGACAAGGTCGTGGAGCTTCTTAAGGTTTCCCCAGAATGTTAATAGAGAAACCTCAGAGAGTGACATAATTGTGGGAGTAATAGACAGTGGTATTTGGCCGGAGTCTGAGAGCTTCAGTGACAAAGGGTTTGGTCCTCCACCGGCCAAGTGGAAAGGATCATGTCACAACTTTACCTGCAACAACAAAATAATTGGCGCAAAGTACTTCAATCTGGAGAAAGAGTTTGCAAAAGATGATATAATATCTCCAAGAGACGCAGAAGGTCATGGATCACATTGTGCATCCACAGTTGCTGGAAACTCGGTTAACTCAGTGAGTGTGTTTGGTTTAGCCTCAGGGACTGCCCGTGGAGGAGTTCCGTCTGCCCGAATCGCTGTGTACAAAGTATGTTGGAAGACGGGAAGTTGTGGCGATGCTGACACCCTTGCAGCATTTGATGAAGCTATCAGTGATGGAGTAGACGTAATTTCTATTTCAACAGGACTCGGAGCAGTAGTCTACCTTCCGTATTTCAAAGATTCAAATAATATAGGAAGTTTTCATGCAATGAAAAAAGGGATACTAACCTCAAATTCTGCCAATAATTTGGGTCCAGGTCTTTCCTCAATGACAAATTATCCACCATGGTTACTTTCTGTGGCTGCAAGCGCTTTCGACAGAAAGATTGTCACCAAGGTGAAGCTGCGCAATGGCGCAGTATATGAGGGGGTTTCAATCAACACGTTTGATCTTAAGGGAAAACCGTATCCACTTGTATATGGTGGAGATGTACCTAATATTGGTGGTGGACATAACAGCTCGACATCCAGGTTTTGCGTAAAGGACTCTTTGGATGAACATTCAGTAAAGGGAAAGATTGTTCTGTGTGAAAGCATTCAGAGTTCAGAAGATGTAGGGTTTTTATCTGGGGCAGCCGGTGTTATATTTGGAAATAATTACCCTAAAGATTTGCCCGGAGCATATGCCTTGCCTGCTTTGGAGGTTACTCAATGGGATCAAAGACTCATACATTCTTATTTAAATTCAAACAGGAATGCAACAGCCACAATATTTAAGAGTGAAGAAGTAAACGATGGACTAATCCCTTTCATATCTTCATTCTCCTCAAGAGGTCCAAATCCAATCACACCAAATACTCTAAAGCCTGACATTGCTGCTCCTGGAGTTGAAGTCATAGCTGCATGGTCTCCAATTGACCCAATTTCAGATGTTAAAGGTGACAAAAGAAAAGTACTATATAATGTAATCTCAGGCACTTCAATGGCATGCCCTCATGCTACTGCAGCAGCTGCATATGTCAAATCATTTCACCCCAATTGGTCTCCTGCCATGATCAAGTCTGCACTGATGACCACTGCTATTCCAATGAGTCGCACTCTGAATCCTGAAGCAGAATTTGCATATGGAGCTGGGCTTATTAATCCTGCTAAGGCTGCAAATCCTGGTTTAGTGTATGATATTAGTGAAGCAGATTATGTAAAGTTCTTGTGTGGAGAAGGATACACAGATAAAGAGCTTCGAGTCCTAACTGAAGATCATAGTAGTTGCAAAGGACAAGCAAGCAAGAAAGCTGTATATGAATTAAACCTCCCATCGTTTGCACTTTTTGTAAATGGTTCAGATTTTAGTAGTGCTTATCGAAGAACCGTTACAAATGTGGGATACAAAACATCTACGTATAAAGCCAGAGTAATTGCTCCATCTTTGTTAAATATTCAAGTGAAACCCAGGACTCTTTCCTTCACATCTATAGGGCAGAAAAAATCATTTTATTTAATAATTGAAGGAAGAATTAATGTGGAAATACTCTCTGCTTCTTTGATTTGGGATGATGGAAATCATCAAGTTAGAAGCCCGATTGTAGTTTACGGGTCTGTAGACAGTTGA 2235 0.4103 MNFNSFNMIYHFSPHRLTLSTWVITLRAWTLLPYLLFIPPWLKMSLAVILILLVIYGKINYENVLASSDFKPEAVIHSYKNFNAFVMKLTEEEAKRMAEMENVVSVFPNGKNRLHTTRSWSFLRFPQNVNRETSESDIIVGVIDSGIWPESESFSDKGFGPPPAKWKGSCHNFTCNNKIIGAKYFNLEKEFAKDDIISPRDAEGHGSHCASTVAGNSVNSVSVFGLASGTARGGVPSARIAVYKVCWKTGSCGDADTLAAFDEAISDGVDVISISTGLGAVVYLPYFKDSNNIGSFHAMKKGILTSNSANNLGPGLSSMTNYPPWLLSVAASAFDRKIVTKVKLRNGAVYEGVSINTFDLKGKPYPLVYGGDVPNIGGGHNSSTSRFCVKDSLDEHSVKGKIVLCESIQSSEDVGFLSGAAGVIFGNNYPKDLPGAYALPALEVTQWDQRLIHSYLNSNRNATATIFKSEEVNDGLIPFISSFSSRGPNPITPNTLKPDIAAPGVEVIAAWSPIDPISDVKGDKRKVLYNVISGTSMACPHATAAAAYVKSFHPNWSPAMIKSALMTTAIPMSRTLNPEAEFAYGAGLINPAKAANPGLVYDISEADYVKFLCGEGYTDKELRVLTEDHSSCKGQASKKAVYELNLPSFALFVNGSDFSSAYRRTVTNVGYKTSTYKARVIAPSLLNIQVKPRTLSFTSIGQKKSFYLIIEGRINVEILSASLIWDDGNHQVRSPIVVYGSVDS 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00967 744 FunFam Subtilisin-like protease SBT1.5 137 347 - -
Vimu1g00967 744 Gene3D Peptidase S8/S53 domain 137 608 IPR036852 GO:0004252|GO:0006508
Vimu1g00967 744 Gene3D - 335 473 - -
Vimu1g00967 744 CDD PA_subtilisin_like 342 466 - -
Vimu1g00967 744 ProSitePatterns Serine proteases, subtilase family, histidine active site. 205 215 IPR022398 -
Vimu1g00967 744 Pfam Fibronectin type-III domain 643 738 IPR041469 -
Vimu1g00967 744 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 58 115 IPR037045 -
Vimu1g00967 744 Gene3D - 612 741 - -
Vimu1g00967 744 CDD Peptidases_S8_3 114 570 IPR034197 -
Vimu1g00967 744 ProSitePatterns Serine proteases, subtilase family, serine active site. 534 544 IPR023828 -
Vimu1g00967 744 PRINTS Subtilisin serine protease family (S8) signature 201 214 IPR015500 -
Vimu1g00967 744 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Vimu1g00967 744 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Vimu1g00967 744 Pfam Subtilase family 136 587 IPR000209 GO:0006508|GO:0008236
Vimu1g00967 744 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 71 738 IPR045051 -
Vimu1g00967 744 SUPERFAMILY Subtilisin-like 114 599 IPR036852 GO:0004252|GO:0006508
Vimu1g00967 744 Pfam Peptidase inhibitor I9 65 115 IPR010259 -
Vimu1g00967 744 ProSiteProfiles Serine proteases, subtilase domain profile. 119 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00967 Vimu-Chr1 6937021 6940897 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00967 32 739 Subtilisin-like Serine Gene Family AT5G59190 47.149 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00967 - - gmx:100815516 1153.27