Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00935 ATGGAGGGGAAGGAGCAGGATGTGTCGTTGGGAGCGAACAAGTTCCCAGAGAGACAACCGATTGGCACGGCGGCGCAGAGCCAAGACGACGGCAAGGACTACCAGGAGCCACCGCCAGCACCGCTTTTTGAGCCCTCAGAGCTTACGTCATGGTCGTTCTACAGAGCAGGGATAGCAGAGTTTGTAGCAACTTTTCTGTTTCTCTACATCACCATCTTAACCGTCATGGGTGTCCTTAGGTCTCCCACCAAGTGCCAATCCGTTGGTATTCAAGGAATCGCTTGGGCCTTCGGTGGCATGATCTTCGCCCTCGTTTACTGCACCGCCGGAATCTCAGGTTCACTTTTTTTTTTTCTCAACAACTCAAGAAAAAAAAAATCTTTTTTTTTTTAA 393 0.4962 MEGKEQDVSLGANKFPERQPIGTAAQSQDDGKDYQEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITILTVMGVLRSPTKCQSVGIQGIAWAFGGMIFALVYCTAGISGSLFFFLNNSRKKKSFFF 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00935 130 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vimu1g00935 130 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vimu1g00935 130 MobiDBLite consensus disorder prediction 1 42 - -
Vimu1g00935 130 Pfam Major intrinsic protein 47 114 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vimu1g00935 130 Gene3D Glycerol uptake facilitator protein. 40 117 IPR023271 -
Vimu1g00935 130 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 114 IPR034294 -
Vimu1g00935 130 SUPERFAMILY Aquaporin-like 47 115 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00935 Vimu-Chr1 6544439 6544831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00935 1 113 Major Intrinsic Protein MIP AT4G00430 84.956 8.68e-68 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00935 K09872 - fve:101295462 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00935 1 6544439 6544831 Vimu1g00935 1 6544439 6544831 ECH
Vimu6g01749 6 15910761 15911952 Vimu1g00935 1 6544439 6544831 PCT