Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00855 TTGTATGTTCTTGCTTCGCAACATGTTCTAGCAAATATCCTCATAGACACATCCCTTACTTTTCCAGAAAAGATCACTCTTTCACGTTGTCGATGCTTCCAAAGTGAGGACACTCAAAGAAAGGAATTACGAAACAATCATTGTGGCTTCTCACGACAGACAGAGATGTATTCGAAAGTAACAAAAGTGTCTGAGTGGCAAGATGGTCGAGTATGTATTAAAGGGTGGACAAGTTTTTGTACAAAGAACAAGATCAAAGAAAATGATGTATGCATATGTGAAATTTTATCAGGGAAAGACCAAATAGTAAGAACAATTCAGGTGCATGTGCTTGGTGCTAGGAACGGGTGA 351 0.3875 MYVLASQHVLANILIDTSLTFPEKITLSRCRCFQSEDTQRKELRNNHCGFSRQTEMYSKVTKVSEWQDGRVCIKGWTSFCTKNKIKENDVCICEILSGKDQIVRTIQVHVLGARNG 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00855 116 Gene3D - 16 114 IPR015300 -
Vimu1g00855 116 SUPERFAMILY DNA-binding pseudobarrel domain 61 111 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00855 Vimu-Chr1 5771984 5772428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00855 57 111 B3 DNA Binding Superfamily AT3G06160 42.857 6.94e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00855 - - gmx:100810634 166.777