Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00843 ATGTCGCCGGTGACAGGAGCTCGTGTCCCTCTCCTCCCTGACTCTAAGGGTGGTGTTCCTCCGGCAACAGTTTCTGGTGCCGTGTTTAATGTTGCCAACAGCATAATCGGTGCTGGCATAATGTCTCTTCCGGCAACCTTGAAAGTTCTTGGTGTGATTCCGGCTTTGGTGTTGATTTTTGTGATTGCGTTTCTGGCTGAACTTTCTGTAGACTTCCTGATGAGGTTCACACGTGCTGGCCAAACGACAACATATGCTGGTGTGATGAGAGAGGCGTTTGGACCAGTGGGAGCTGTAGCAGCTCAGATAGCTGTTGGATTTACTAATATGGGGTGTTTAATTATGTACCTTATTATTGCTGCGGATGTGTTTTCTGGTAATAATCGCCAAGGGGAAGTACACTTGGGTGTTTTGCAACAATGGTTTGGAGTTCACTGGTGGAATTCAAGGGAATTTGCTTTGTTAGTGATCTTGCTCTTAGTTTTGCTTCCATTGGTCTTGTACCGTCGTGTAGAGTCGTTGAAGTTCAGCTCTGCAATATCAACTTTTCTTGCTGTGGCCTTTGTTACAACTTGTACTGTGTTGGCCATAATTGCTATTGTAGAAGGAAAAACACAGTCTCCTAAATTGGTTCCTCGTTTGGATGAACAGACCACTTTCTTTGACCTGTTTACTGCAGTTCCAGTGATTGTCACAGCTTACACATTTCATTTTAATGTACATCCAATTGGATTTGAACTTGCCAATGCATCAGATATGACAACAGCAGTCCGATTAGCATTACTGCTTTGTGCAGCAATTTACTTTTTTATAGGACTATTTGGTTATCTCTTGTTTGGAGATTCCACACAATCTGATATTCTGGTAAATTTTGACCAGAATACTGGATCTGCAATTGGTTCATTGCTCAATGTTTTAGTTCGATTAAGCTATGGATTGCATGTTATACTCACTTTTCCAGTTCTGAACTTTGCCTTGAGAACCAACATAGATGAATTCTTCTTTCCCAAGAAGCCTCTATTAGCCACGGACACTAAGAGATTTGTGAGTCTCACTGTAGTGTTACTAGTCTTGAGCTACCTTGCTGCTGTAGTAGTCCCAGATATTTGGTACATCTTTCAGTTTGTGGGATCAACATCTACTGTGTGTCTTTCCTTTGTCTTCCCCGGTGCTATTGTTCTAAGGTAA 1188 0.4226 MSPVTGARVPLLPDSKGGVPPATVSGAVFNVANSIIGAGIMSLPATLKVLGVIPALVLIFVIAFLAELSVDFLMRFTRAGQTTTYAGVMREAFGPVGAVAAQIAVGFTNMGCLIMYLIIAADVFSGNNRQGEVHLGVLQQWFGVHWWNSREFALLVILLLVLLPLVLYRRVESLKFSSAISTFLAVAFVTTCTVLAIIAIVEGKTQSPKLVPRLDEQTTFFDLFTAVPVIVTAYTFHFNVHPIGFELANASDMTTAVRLALLLCAAIYFFIGLFGYLLFGDSTQSDILVNFDQNTGSAIGSLLNVLVRLSYGLHVILTFPVLNFALRTNIDEFFFPKKPLLATDTKRFVSLTVVLLVLSYLAAVVVPDIWYIFQFVGSTSTVCLSFVFPGAIVLR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00843 395 Pfam Transmembrane amino acid transporter protein 22 392 IPR013057 -
Vimu1g00843 395 PANTHER AMINO ACID TRANSPORTER 19 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00843 Vimu-Chr1 5678827 5682284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00843 22 395 Amino Acid or Auxin Permease AAAP Family AT3G56200 60.428 2.13e-158 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00843 - - gmx:100800330 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00843 1 5678827 5682284 Vimu6g01671 6 15352124 15355720 PCT