Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00804 ATGACATGCCAGCAGGTGAGACGCAGTAGTGCTGAAAATAGAAGATGGTTATCTGTTAGGTCGTACTTGTGTGGCGATGAGTTCAATTCAGTCCTTGCAGAGAATGATTCAGCTTCAGTTAAGAGCACTGAAGTCACGGTTTCGCAGTCCATTTTGGAAGACTTGAAGGATAAAGGAGACACCGATAGTGAAGAAACTGTGGAGAATGTAACACAGAAAAGGCCAAATTCAGACTCCAAATCTTTGACTGAGGAAGAAGCAGCAATTCTTATTCAATCAGCATTTAGAGACTTCCTGTTGAGGCGTCAAAATGGAGAAATCAGATCAGAAACAGGAAAAGAGGAGTTCAATTTAGTAACAGAAAGTCCTGATAGAAAGTCCATGGGCACATCAGTTGAAGTCCAAACTGCAAACTCCACTGAAGTTTTCTCGGTTGAAGGAGAAAAAAAGGGCCTTTGCCACCGAATTCAGCGCAGGACCAGAACTCAAGTAATAAAGCAAAAGGAAGACTGGGATGACAGCACTGTAAGTAGTTATGTTTCAAAAATGAGGATGCAGAGTAGAATGGAGGCATCAACCAGAAGAGAAAGAGCAATGGCATATGCTTTCTCACAACAGCTAAGGATTTGTTCAAAGAGAAAATTAACAAAACACAACAGCTTGGAGTCAAATATGAGTTGGAGCTGGCTTGAGAGATGGATGGCAACACGCCTTCCAGAGACTTCATCAGTTGAAAGCCATGCATTGAAGCAATATGAACCTTCTAATTGTAATAACAAATTCACAATCATGACAAGATTTTTAGATGCTGCTGGGGAAGAAAAGGAGAGCTGCGGATCAAATGAGGTGCCCCTTCATTTTGATGACTATTCAATCAATTCAGAAGAAGAAAAAGTTAGCTTCAAACCCCACACAGCAAAGACCAACTTCAAGGCTAGGAGAACCGTTTCAAGACGGAAAACAGTGCCAAGTTATCAATTCCATGAAGAGCAGCAGCCAAAGGTAAGCAAGAAAGATGGTTGGGGAAATGCTAGCAAGGATTTTAAGCAAAAACAAAAGCAAGCGGGAAGCAGGACAGAGATTACATTAAGCTCCTCGAAAGCTTCTAATGTGTAA 1116 0.4149 MTCQQVRRSSAENRRWLSVRSYLCGDEFNSVLAENDSASVKSTEVTVSQSILEDLKDKGDTDSEETVENVTQKRPNSDSKSLTEEEAAILIQSAFRDFLLRRQNGEIRSETGKEEFNLVTESPDRKSMGTSVEVQTANSTEVFSVEGEKKGLCHRIQRRTRTQVIKQKEDWDDSTVSSYVSKMRMQSRMEASTRRERAMAYAFSQQLRICSKRKLTKHNSLESNMSWSWLERWMATRLPETSSVESHALKQYEPSNCNNKFTIMTRFLDAAGEEKESCGSNEVPLHFDDYSINSEEEKVSFKPHTAKTNFKARRTVSRRKTVPSYQFHEEQQPKVSKKDGWGNASKDFKQKQKQAGSRTEITLSSSKASNV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00804 371 ProSiteProfiles IQ motif profile. 84 113 IPR000048 GO:0005515
Vimu1g00804 371 MobiDBLite consensus disorder prediction 355 371 - -
Vimu1g00804 371 MobiDBLite consensus disorder prediction 56 83 - -
Vimu1g00804 371 MobiDBLite consensus disorder prediction 56 71 - -
Vimu1g00804 371 MobiDBLite consensus disorder prediction 311 371 - -
Vimu1g00804 371 PANTHER IQ-DOMAIN 5-RELATED 38 336 - -
Vimu1g00804 371 MobiDBLite consensus disorder prediction 331 354 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00804 7 326 IQD Protein Family AT5G35670 41.005 3.10e-71 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00804 - - gsj:114383427 616.69