Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00801 AAAAGGGAGAGAGAGAATCCCTGTGGGGTGTGTGGCCACTACCACAAATATGAAGAAGGGGAAGTGTGTTCCATTTGCGGTCACCGGATTCCAGTTGGATCGGAGAAAACTTCGATACAAGTTAGTGCTTTTCCTTCTGTGATTCTGCCGGAATTTCTTTACCTAGGAAGCTATGACAACGCATCACGTTCGGAGCTTCTCAAGACACAGGGGATTACTCGTATCCTCAATTTTCTAGGTGTATACCAGCAACTACAAGAGTATGAGCAGAAGATCTATGGACCAATCGACAGTGGAAGCTCTCTGCTTCCCAGTTTCTCGCCAACAGTTCTTCCTTCAATTAGCTTTGGTTTCCCAAAGATCAACGATCCAGCTCAACTTCCTTCCTTCAGCACTGCTGGAACTCCTTCAATATTTGCCAGACCAACCTTAGACATTGCTCCTACAGAGTTTACATTTGGCGCTGGACCAATGCAGAAGAATGTGGCTGGAAGTCCCTTCAATGCCAACCAAACTAATCCAAATGGTACTGATATACAAATGGATGGCTCTTGA 555 0.4541 KRERENPCGVCGHYHKYEEGEVCSICGHRIPVGSEKTSIQVSAFPSVILPEFLYLGSYDNASRSELLKTQGITRILNFLGVYQQLQEYEQKIYGPIDSGSSLLPSFSPTVLPSISFGFPKINDPAQLPSFSTAGTPSIFARPTLDIAPTEFTFGAGPMQKNVAGSPFNANQTNPNGTDIQMDGS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00801 184 Gene3D Protein tyrosine phosphatase superfamily 32 92 IPR029021 -
Vimu1g00801 184 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 81 184 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Vimu1g00801 184 MobiDBLite consensus disorder prediction 164 184 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00801 1 85 Protein tyrosine phosphatase (PTP) family AT2G04550 71.591 7.68e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00801 K04459 - gmx:100808721 182.57