Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00796 ATGGCTGCCACCAACTTCTTCACCCAAACACCAAAAGATCAAACTTCCATTAATAATCCTAACCAATATTTATTTTATCACAAGTTCACTTCCTACCATACTCCAAAGTCACCCTACGCAACACACATAATGGAAGGCCATGGAAGAACAATAACATCACTACTTGGGGTCACTTTTGCTTCTGCAGCAACTGGTTATGATAATGCAACTTCGGATGTTCTGTCTGTGATACCATTATGGAAGCAATTAGAGTACTACAAGGGATACCAAAAGAATTTGAGTGCCTATCTCGGTGAAACCAAGGCAAAGGAGACCATAACTGATGCATTACACCTTACCAGTCTTGGCACAAATGACTTTCTTGAGAACTACTACACCATGCCTGGTAGAGCATCCCAATTCACACCCCAACAGTACCAAATTTTTCTTGCTGGAATAGCTGAGAACTTTATAAGGAGCCTCTATGAACTTGGTGCTAGGAAGATATCCTTAGGAGGGTTACCTCCCATGGGATGCTTGCCACTGGAAAGAACCACAAATATTGCTGGTGGGAATGATTGTGTTGCCAGATTCAATAACATAGCATTGGAGTTCAATGATAGGCTGAAGAATTTGACCGCTAAGCTCAACCAAGAGCTTCCTGGAATTAAATTGGTGTTTTCAAATCCGTATTACATTATGTTGAACATCATAAGAAAGCCTGAACTTTACGGTATGTTGTCACCCCCAGAATCATGCATCTTAAAAGATTTCAATCAACCTCAGTGGCATGTTGTGCCACTGGAATGTTCGAGATGGGTTACGCATGCAGCAGGGGCCAGATGTTCAGCTGCACAGATGCTTCCAAATATGTGTTTTGGGACTCTTTCCATCCAACTGAGAAGACAAATAGTATTGTTGCAAAGTACATGGTGCTGCGTGTTTTATATCAATTTTTACAATAAATAA 948 0.4093 MAATNFFTQTPKDQTSINNPNQYLFYHKFTSYHTPKSPYATHIMEGHGRTITSLLGVTFASAATGYDNATSDVLSVIPLWKQLEYYKGYQKNLSAYLGETKAKETITDALHLTSLGTNDFLENYYTMPGRASQFTPQQYQIFLAGIAENFIRSLYELGARKISLGGLPPMGCLPLERTTNIAGGNDCVARFNNIALEFNDRLKNLTAKLNQELPGIKLVFSNPYYIMLNIIRKPELYGMLSPPESCILKDFNQPQWHVVPLECSRWVTHAAGARCSAAQMLPNMCFGTLSIQLRRQIVLLQSTWCCVFYINFYNK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00796 315 Pfam GDSL-like Lipase/Acylhydrolase 49 215 IPR001087 GO:0016788
Vimu1g00796 315 PANTHER GDSL ESTERASE/LIPASE EXL3 54 247 - -
Vimu1g00796 315 Gene3D SGNH hydrolase 2 265 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00796 Vimu-Chr1 5320852 5322421 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00796 56 246 Pollen Coat Proteome AT1G75910 33.163 9.46e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00796 - - vum:124845903 364.77