Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00762 ATTTATCAGATTTTGTTTCTTGATATTGCATGTTTCTTCAACGGGTGGGTGAAAGAGCGTGTGGAACAAATTCTAACAATTTGTTGCCGTTGTCCAGCTAATGGAATTGATGTACTAATTGGTAAATCATTGGTAAGTTGTGATGGATCACGTTTATGGATGCATGATTTACTTCAAGAAATGGGAAGAAAAATTGTTGTCGAAAAATGTCTGATAGATGCTAGCAAACGCAGCAGGTTGTGGTCACCCCATGACATTGATCAAGCACTAAAAAGAAAGAAGAAAAATGAATCGATTCAGGGTATAGTTTTGAAGTCGTCCACTGAGCCATACATTGCAAATTGGGATCCCGAAGCCTTCTCAAAGATGTACAATCTCAGATTCCTTATGATTAATTTTCCCAATATACAATTTGCCCGTGGCCTCAAATGTCTTAGCAGTTCACTGGAAGTTCTTCAGTGGACAAAGTGTACTTTGGAAGCTCTGCCGCTTGGCGTTAAGCTTGAGAAACTTGTAGTGTTAAAAATGCGTTACAGCAAAATAAAGAAGATCTGGAGTGATTCTCAACATTTCAAAAGGTTGAAGTTCATTGATCTGAGCCATTCCGAAGATCTAATTGAAAGTCCTATAGTTTCTGAGGTTCCATGTCTTGAAATTTTGCTTCTTGAAGGTTGTAAAAACCTTGTCAAGGTTCACCAATCTGTTGGACTGCACAAGAAGCTTGTCGTGTTGAACTTGAAAGATTGCATAAACCTTCAAATCCTACCAACAGAGTTTAAAATGGATTCTTTGGAGGAATTGATTCTTTCTGGCTGCTCAAAACTTAAAAAGCTCCCCAAGTTTGCAAACAATGTGCAATGTTTA 864 0.3796 IYQILFLDIACFFNGWVKERVEQILTICCRCPANGIDVLIGKSLVSCDGSRLWMHDLLQEMGRKIVVEKCLIDASKRSRLWSPHDIDQALKRKKKNESIQGIVLKSSTEPYIANWDPEAFSKMYNLRFLMINFPNIQFARGLKCLSSSLEVLQWTKCTLEALPLGVKLEKLVVLKMRYSKIKKIWSDSQHFKRLKFIDLSHSEDLIESPIVSEVPCLEILLLEGCKNLVKVHQSVGLHKKLVVLNLKDCINLQILPTEFKMDSLEELILSGCSKLKKLPKFANNVQCL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00762 288 SUPERFAMILY L domain-like 54 283 - -
Vimu1g00762 288 Gene3D Ribonuclease Inhibitor 91 288 IPR032675 -
Vimu1g00762 288 SUPERFAMILY "Winged helix" DNA-binding domain 5 91 IPR036390 -
Vimu1g00762 288 Pfam Leucine Rich Repeat 170 189 IPR011713 -
Vimu1g00762 288 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 280 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00762 Vimu-Chr1 5015370 5016602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00762 5 288 WRKY Transcription Factor Family AT4G12020 35.786 5.77e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00762 - - vra:106763277 528.094