Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00761 ATGTTAAGTGGAGAATCTTCCTCAAACTCTTCGAGATGGACATACCATGTTTTTTTGAGTTTTCGAGGAGAAGACACGCGCTTAGGTTTCACAGATCACTTGTACGCTGCGTTGGTGAGAAAGGGAATCATAACTTTCCGAGATGACAAAAATCTAGAGAAAGGAGATAAGATAGATAAAGAACTATTTAAAGCAATTAAAGAGTCCCTCGCGGCCATTGTGATTCTCTCTGAGAACTATGCCTCTTCCTCTTGGTGTTTGGATGAGCTCAACAAAATTCTGGAATCAAATAGAGCTCTGGGGAGAAAAGTTTTCCCAGTTTTCTGTGGGGTTAGTCCTAGTGAGGTTCAACACCAGACAACAAAGAGTTTTGAAGAGGCTTTTCAGAAACATGAAAGAAGATTTGACAAAGACATAGAAAAGGTGCGACAATGGAGAGATTCCTTGAAGGAGGTTAGCCAAATTGCTGGCTGGGAGTCCAAAAATTACCAGCATCAAACGGAGCTCATTGAAAACATTGTTGAATCGGTATGGACAAAGCTACGTCCTGAAATGCCATCTTTCAACGATGGGTTAGTTGGAATTGGCTCAAGGGTTAAGAAAATGGACTCTCTTTTAAGGATAGAATCGAAGGATGACGCTCGCTTTATCGGAATATGGGGCATGGGTGGCATTGGAAAGACAACCGTAGCGAGAGTTGTCTTCAGGAAAATCCAGCACCAGTTTGATATTAGCTGCTTCCTTGACAACGTCAGAGAGATTTCAAAAGAAAGTGGTGGCAGGCTTCGTTTACAAGGAAAACTCCTTTCTCATCTGGGTATAAAAGGCTTGGAAATTAGAGATTTAGACGAGGGAAAGAACACAATAAGAGAACTTCTATTCAAGAAGAAAGTTCTTCTTGTCATTGATGATGTTGATGATACTAGCCAACTAGAGAGTTTGGCTGATAGTTTAGAGTGGTTTGGCCCCGGGAGCAGAGTTATAATAACAACGAGAGACACACACGTCCTAATATCACATGGAATAGTTGAAAACTACAAAATTGACATCTTAAATTCTGACGAATCCCTTCAACTCTTGAGCCAGAAAGCCTTCAAAAGAGATAAACCTGATGAACATTATTTGGAGTTGACAAAAGCTGTTGCCAAATATGCAGGAGGCCTCCCTTTGGCCTTGGAGCTGTTAGGTTCATTTCTGTGTGGAAGAAGTGAATCCCAATGGAAAGAAGTAGTGGATATGATAAAAGAAGTGCCCCCGAGTCATATTGCGATGAAATCGCTTAGAATAAGCTACAATGGGTTGCCGCTACGTTATAAAACTTTGTTTCTTGATATTGCATGTTTCTTCAAAGGGAGGATAAAAGAGCTTGTGATACAAGCTCTAGAAATTTGTGAGCGTTATCCACCAGTTGGAATTGAACTTCTGGTTGAAAAATCACTAGCAACTTATGATGGCTTTACCATAGGGATGCATGATTTGCTTCAAGAATCAGCAAGGGAAATTGTTAAAGAAGAAAGTTATGTGGATCCGGCCAAACGAAGTAGGTTGTGGACTCTAGAGGAGACAAATGAAGCAAACGAATCAATTGAAGGTATTGTTTTGAACTCGCCTGAAAAGGAAGAAGCTATTTGGGATCCTGAAGCGTTCTCAAGGATGTATAATCTTCAATTACTTATCATAAACTATCGTGTAAATCTTCCTACTAGCCTCAAATGTCTTTGCAGTTCTCTGAAATTTCTTCAGTGGATGAACTATCCTTTGGAATCTCTGCCGCTTGGCGTGCTGCTGGATGAACTTGTAGAGTTGAAAATGCATTCCAGCAGAATAAAAAAGATTTGGAATGGAAATCAAGATTTTGCAAAGCTGAAGTTCATTGATTTGAGCTATTCTGAAGATCTAATTCAAACCCCAATAGTTTCTGGGGCTCCATCTCTTGAAAGATTGCTTCTTATAGGTTGTATAAACCTTGTTGAGGTTCACCCATCAGTTGGACAACACAAGAGACTTGTTCTATTGTTGCTGAAAGATTGCAAGAATCTTCAAATCATGCCAAGAAAATTGGAAATGGATTCTTTGGAGGAATTGATTCTCTCTGGCTGCTCAAAAATTGAAAAACTCCCTGAATTTGGAGAGAACATGAAATCTTTATCACTGCTTAATGTGGAGAATTGCATAAATCTCCTTTCCCTGCCAAATTCCATTTGCAATTTGAGATCTCTCAGAAAACTCTACGTTTCTGGCTGCTCAAGAATCTCAACACTGCCAGATGGTATGAATGAAAATGAATCATTGGAGGAGGTTCATGTGAGTGGTACTGACATAAGAGAAATTCCTTTATGTTTAGAAAAACTTAGAGAGCTCTCCTTTGGTGGAAGGAAAGAAACAACACCCAAATCACAAAACTTACTTCAATGGATCTCGAAGTTTATGGGGCTACAAGATATGCAGGAGTCGATCGTGCCTCCTCTTTCCAGTTTATTGGCCTTGGAGTCCTTGGATTTAAGTTATCAAGGTCTTACTGATGAATCAATTCCTAGTGATCTTGGTCCTTTATCATTGTTCAAGCGTTTAGATCTAAGTGGTAACAATTTTGTTAACCCACCTGCTCAATGCATTATAAGTCTTTCTATGTTGCATACTTTGTCCTTCAATGATTGCCCAAGACTTGAATCCTTGCCATTGCTTCCACCAAATTTACAAGCTTTGTACGCAACTAATTGTCCTAAATTGAAACCCTTTCACTTGGTTGAAGATACTCTATGGAAGATCTTTGAGTCACATTCACATGAGGATCCGATTGAAGGGCCAGAGCTTTGGTTCATAATACCAGGGAATGAAATTCCATCTTGGTTCAACAATCAAAACTCTCTTGCAATTGATTCATCAGATGAAACGTATGAGAAGTTGTGTTGTGATTCAGTTACTTCAATAACAGTGGATGTACCGGAGGACTTCCAGTTAAGTGAATGGTGGGGAATTGCAGTATGCCTAGTATTAGAACCTTTGAACATGGATGTGCCATCTTCATCTAATGCAAGGTCAACTTCTACTGTCAATGAGGAAATTGGCATTTATTACTGGGTATGTAAAGCTCCTGATAAAGATCCTGACCCAAATTTTCCTATAGCAGCCAAGTTTGGGCACATGCTGTATAAATTCAAGGACCCTTACATCCATATTATATTCTTGAATGCTGATCATGTGTATATTCAGCATTATCTAAGTGGGCAGCAAACACAGCTTGAAGTGATACTTTTTGTTGAAAATTTTTCTGAATCATGCAAGGCAAGAATAAAGAAGTGTGGGTGCCGTGTGATATGTAAGGAAAAAATTGAAGAATGGCGGAAGCACTCAGATGATCTTATTATATCAAGAATAACAGAAACGAATCATGAATTGGAGGAGGAAGAACCTACTTCTCCAAACACATCCTCTCCCATGGAGAAAACAGAAGGACAAACTACCCTTGGTAAATGA 3477 0.394 MLSGESSSNSSRWTYHVFLSFRGEDTRLGFTDHLYAALVRKGIITFRDDKNLEKGDKIDKELFKAIKESLAAIVILSENYASSSWCLDELNKILESNRALGRKVFPVFCGVSPSEVQHQTTKSFEEAFQKHERRFDKDIEKVRQWRDSLKEVSQIAGWESKNYQHQTELIENIVESVWTKLRPEMPSFNDGLVGIGSRVKKMDSLLRIESKDDARFIGIWGMGGIGKTTVARVVFRKIQHQFDISCFLDNVREISKESGGRLRLQGKLLSHLGIKGLEIRDLDEGKNTIRELLFKKKVLLVIDDVDDTSQLESLADSLEWFGPGSRVIITTRDTHVLISHGIVENYKIDILNSDESLQLLSQKAFKRDKPDEHYLELTKAVAKYAGGLPLALELLGSFLCGRSESQWKEVVDMIKEVPPSHIAMKSLRISYNGLPLRYKTLFLDIACFFKGRIKELVIQALEICERYPPVGIELLVEKSLATYDGFTIGMHDLLQESAREIVKEESYVDPAKRSRLWTLEETNEANESIEGIVLNSPEKEEAIWDPEAFSRMYNLQLLIINYRVNLPTSLKCLCSSLKFLQWMNYPLESLPLGVLLDELVELKMHSSRIKKIWNGNQDFAKLKFIDLSYSEDLIQTPIVSGAPSLERLLLIGCINLVEVHPSVGQHKRLVLLLLKDCKNLQIMPRKLEMDSLEELILSGCSKIEKLPEFGENMKSLSLLNVENCINLLSLPNSICNLRSLRKLYVSGCSRISTLPDGMNENESLEEVHVSGTDIREIPLCLEKLRELSFGGRKETTPKSQNLLQWISKFMGLQDMQESIVPPLSSLLALESLDLSYQGLTDESIPSDLGPLSLFKRLDLSGNNFVNPPAQCIISLSMLHTLSFNDCPRLESLPLLPPNLQALYATNCPKLKPFHLVEDTLWKIFESHSHEDPIEGPELWFIIPGNEIPSWFNNQNSLAIDSSDETYEKLCCDSVTSITVDVPEDFQLSEWWGIAVCLVLEPLNMDVPSSSNARSTSTVNEEIGIYYWVCKAPDKDPDPNFPIAAKFGHMLYKFKDPYIHIIFLNADHVYIQHYLSGQQTQLEVILFVENFSESCKARIKKCGCRVICKEKIEEWRKHSDDLIISRITETNHELEEEEPTSPNTSSPMEKTEGQTTLGK 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00761 1158 MobiDBLite consensus disorder prediction 1127 1158 - -
Vimu1g00761 1158 MobiDBLite consensus disorder prediction 1139 1158 - -
Vimu1g00761 1158 Gene3D Ribonuclease Inhibitor 761 934 IPR032675 -
Vimu1g00761 1158 ProSiteProfiles TIR domain profile. 13 181 IPR000157 GO:0007165
Vimu1g00761 1158 Pfam NB-ARC domain 211 417 IPR002182 GO:0043531
Vimu1g00761 1158 Gene3D - 8 182 IPR035897 -
Vimu1g00761 1158 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
Vimu1g00761 1158 Gene3D - 183 342 IPR027417 -
Vimu1g00761 1158 SMART till_3 14 155 IPR000157 GO:0007165
Vimu1g00761 1158 Gene3D Ribonuclease Inhibitor 689 760 IPR032675 -
Vimu1g00761 1158 Gene3D Ribonuclease Inhibitor 541 688 IPR032675 -
Vimu1g00761 1158 PRINTS Disease resistance protein signature 216 231 - -
Vimu1g00761 1158 PRINTS Disease resistance protein signature 292 306 - -
Vimu1g00761 1158 PRINTS Disease resistance protein signature 385 399 - -
Vimu1g00761 1158 PRINTS Disease resistance protein signature 617 633 - -
Vimu1g00761 1158 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 183 - -
Vimu1g00761 1158 SUPERFAMILY L domain-like 490 924 - -
Vimu1g00761 1158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 445 IPR027417 -
Vimu1g00761 1158 Pfam TIR domain 15 190 IPR000157 GO:0007165
Vimu1g00761 1158 Gene3D - 350 435 IPR042197 -
Vimu1g00761 1158 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 780 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00761 Vimu-Chr1 5009214 5013315 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00761 10 801 WRKY Transcription Factor Family AT4G12020 31.943 1.99e-93 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00761 - - vra:106763277 2198.7