Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00756 ATGAAACTCCTTGTAGAGATGATGACTGATGTTGTTGCTGAAACTTCTTGGTGTTTTGTTGTTCCTTCATGCTCCTCCTGGTCGCCATTTGGGTTTGCCGCTCGGCCCCACGGTCAAACCTTGATCACGTCACTTTCTGCTCTTCCGTCTGCTTCTTCTTCTTCAGGACCGTCCGGCTGGTATCCGCTGCGACCGGCCGGTGATCTCCAAGTCTTGACCGGAGGGGGGAGGTACCTGAAAAGGCGCTCCGACGCTCAACCATACACTGAAGCTCTCAGAAAGGCAAGCATGTTCATCTTCAACTCCTTATCTCACCACAATTTAAGACTCTCTATTCATGTATCTGACAGTCAGACCTATATTGTATACTTGGGAGAACATTCTCACGGTCCAAATCCTTCCCTTCGTGATCTTGAGTCAGCCACAAATTCTCACCATGATTTACTGGCTCCATTCATGGGAAGCCATGAGAAAGCAAAGGAAGTAGTGATGTACTCGTACAATAAGCACATAAATGGCTTTGCTGCAAGGCTTGAAGAGGAAGAGGCATCAGAGATTGCAAGTGAGAAAAATGAACACCCAAGTGTAATTTCTGTGTTCTTGAGCAAAGAGTATAAATTGCACACTACCAGATCATGGGACTTTCTTGGGCTGGAAAAATATGGAGGAATTCCTGCAGAATCAGCTTGGTGGAAAGGAAAATTTGGAGAAGATACAGTTATTGGTAATCTGGATTCAGGCGTTTGGCCGGAACACCCAAGTTTCAACGACAACGGATATGGTCCTCTGCCATCAACGTGGCGAGGGAACGGAGTCTGTCAGATTGACCATGTTTCTCTTCCAAACAAGACATTCTGTAACAGGAAGTTGATTGGAGCAAGAATCTTCAGCAAAGGTTACGAGGCACATAATGGGAAACTTGATCCTTCAAAACACACGGCACGTGATTTTGTTGGCCACGGCACCCATACCATGTCAATTGCTGCTGGTAACTTTGTTCCTGGTGCAACTGTCTTTGGCAATGGCAATGGCACTGCAAAGGGTGGATCCCCGAAGGCTCGTATCGCTGCATACAAAGTGTGTTGGTCTACAAATGATGCTGGTAGCTGCCATGAAGCAGACATCCTACAAGCGTTTGATCATGCCATAAATGATGGTGTTCATGTCATCACTGCTTCCATCGGTGGCTCTAATCCTTATATTGAAGCCTTCTTCACAGATGGGATTTCCATAGGGGCATTCCATGCAGTTGCTAGAAACATAGTTGTAGTTTGCTCTGCTGGGAACGATGGACCAGCACCTAGAACTGTCTTAAATGTTGCACCCTGGACTTTCACAGTTGCTGCCAGTACAATCGACAGGGATTTTCTCACCAACATTTCTCTTAGTAAAAATCACCACCTTAAGGGAGCCAGTCTTAATAGAGGCTTACCATCACGGAAATATTATCCATTGGTTCATGCTGCCAATGCTAGACTTCTTAATGCGACAATTGATGACGCTCGACTTTGCAAACCGGGAACGCTTGATACTACCAAAATAAAGGGAAACATATTGATCTGCATTCGACGTGATAAAACATCATCAATAGCTCAGAGTTACGAAGCTGCTAATGCTGGCGCAGTGGGAGTGTTTGTGGTCAATGACGACAAAAGTGGCAACACACTTCTAGCCGAGCCTTATAGTATACCAGGTGCAAATGTGGATCCCTATGAGGACGCGGATATAGATGAACGTGAATGGTGGGGAAAAGGAGGTTCCGACAAGAACAATAGCAGGAAACTTGCTGCTTACATGACTGTAGCAAGAACACATTTAGGTATAAAACCTGCTCCAATTATGGCTGGATTCTCATCCAGGGGTCCCAGTGCAGTGCAGCCATTGATACTTAAGCCAGACGTAACTGCCCCTGGTGTGAACATATTGGCGGCTTATTCACTAGCCGCAAGTCCATCAAATCTACCATCAGATAGACGCCGTATTCCTTTCAATATGCAACAGGGAACCTCTATGTCAGGCCCTCATGTTGCTGGTATCGCAGGTCTTCTCAGAACACTTCATCCTGATTGGAGTCCAGCAGCTATTAAATCAGCCATTATGACTACTGCTACCACACTAGATAACAACAACCTACCGATTCGGGACGCATTTGATCAGATAGCAAGTCCGTTTGATTATGGCTCCGGACATATTCAACCTAACCATGCAATGGACCCTGGACTTGTTTATGACATGAGAACAAGGGATTACTTGAACTTCATATGCGCTCATGATCACAGCCAAAATTTTCTCAGATACTTTAGCAGAATCTCCTACAATTGCCCAGAGTCCTACAACATTGAAAATCTTAACTATCCTTCTATCACGGTAGCAAATCGAGGGATGAACCCTATAAATGTTACTCGGACAGTTACCAATGTGGGGACTCCAACAAGCACATATGTTGTGAAAGCTAACATAACTGAAGGATTTAAGGTTCTTGTTGAACCAAGTTCATTGTCTTTTAAGACTATTGGAGAAAAGAAGACATTTCGGGTTATTCTTCAGGCAACGAGTTGGCCCAGTAACGGTTTTCCAGTATTTGGGAACTTGTCTTGGACAGATGGAAATCACACAGTAGCCAGTCCTATTGTAGTCCTTTAA 2643 0.4487 MKLLVEMMTDVVAETSWCFVVPSCSSWSPFGFAARPHGQTLITSLSALPSASSSSGPSGWYPLRPAGDLQVLTGGGRYLKRRSDAQPYTEALRKASMFIFNSLSHHNLRLSIHVSDSQTYIVYLGEHSHGPNPSLRDLESATNSHHDLLAPFMGSHEKAKEVVMYSYNKHINGFAARLEEEEASEIASEKNEHPSVISVFLSKEYKLHTTRSWDFLGLEKYGGIPAESAWWKGKFGEDTVIGNLDSGVWPEHPSFNDNGYGPLPSTWRGNGVCQIDHVSLPNKTFCNRKLIGARIFSKGYEAHNGKLDPSKHTARDFVGHGTHTMSIAAGNFVPGATVFGNGNGTAKGGSPKARIAAYKVCWSTNDAGSCHEADILQAFDHAINDGVHVITASIGGSNPYIEAFFTDGISIGAFHAVARNIVVVCSAGNDGPAPRTVLNVAPWTFTVAASTIDRDFLTNISLSKNHHLKGASLNRGLPSRKYYPLVHAANARLLNATIDDARLCKPGTLDTTKIKGNILICIRRDKTSSIAQSYEAANAGAVGVFVVNDDKSGNTLLAEPYSIPGANVDPYEDADIDEREWWGKGGSDKNNSRKLAAYMTVARTHLGIKPAPIMAGFSSRGPSAVQPLILKPDVTAPGVNILAAYSLAASPSNLPSDRRRIPFNMQQGTSMSGPHVAGIAGLLRTLHPDWSPAAIKSAIMTTATTLDNNNLPIRDAFDQIASPFDYGSGHIQPNHAMDPGLVYDMRTRDYLNFICAHDHSQNFLRYFSRISYNCPESYNIENLNYPSITVANRGMNPINVTRTVTNVGTPTSTYVVKANITEGFKVLVEPSSLSFKTIGEKKTFRVILQATSWPSNGFPVFGNLSWTDGNHTVASPIVVL 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00756 880 Gene3D - 453 606 - -
Vimu1g00756 880 Pfam Fibronectin type-III domain 782 879 IPR041469 -
Vimu1g00756 880 CDD PA_subtilisin_like 459 575 - -
Vimu1g00756 880 Gene3D - 754 880 - -
Vimu1g00756 880 Pfam Peptidase inhibitor I9 119 208 IPR010259 -
Vimu1g00756 880 SUPERFAMILY Subtilisin-like 207 741 IPR036852 GO:0004252|GO:0006508
Vimu1g00756 880 FunFam Subtilisin-like protease SBT1.5 238 465 - -
Vimu1g00756 880 Pfam Subtilase family 236 709 IPR000209 GO:0006508|GO:0008236
Vimu1g00756 880 ProSiteProfiles Serine proteases, subtilase domain profile. 212 737 - -
Vimu1g00756 880 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 104 208 IPR037045 -
Vimu1g00756 880 FunFam Subtilisin-like protease SBT5.3 109 208 - -
Vimu1g00756 880 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 120 879 IPR045051 -
Vimu1g00756 880 ProSitePatterns Serine proteases, subtilase family, serine active site. 668 678 IPR023828 -
Vimu1g00756 880 Gene3D Peptidase S8/S53 domain 238 750 IPR036852 GO:0004252|GO:0006508
Vimu1g00756 880 CDD Peptidases_S8_3 205 704 IPR034197 -
Vimu1g00756 880 PRINTS Subtilisin serine protease family (S8) signature 667 683 IPR015500 -
Vimu1g00756 880 PRINTS Subtilisin serine protease family (S8) signature 236 255 IPR015500 -
Vimu1g00756 880 PRINTS Subtilisin serine protease family (S8) signature 316 329 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00756 Vimu-Chr1 4917259 4929924 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00756 116 879 Subtilisin-like Serine Gene Family AT2G04160 49.935 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00756 - - gmx:100794135 1320.06