Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00613 ATGAAACAGGGAAGAGGAAGAACCTCTTTTCATCCTATCTCATCAATTCTCTCTTCTCTTCTCCTTTTCCTCTCTCTCTCAGGATCTGCTCATGCTTACAAGAATTACACAGTCGGAGACTCCTTAGGCTGGTTTGACAACACTGAAAACTCCAATGTCAATTATCAGAAGTGGGCTGACACTAAGAAATTCACCTTAGGAGATTTCCTCATTTTCAACACAGACACTAACCACTCTGTGGTTCAGACATACAACTTTACGACATACAAGGAATGTGATTACGATGATGCTCAAGACAAAGACACGACCCAGTGGTCGGCATCTGATCCATCCAACACCCAAACACATCCTGTGACGGTGGCGATTCCTCTGATGAAGGAGGGCACAACGTACTTTTTCTCTGGTGATTATGATGGTGATCAGTGCAGGAGTGGACAGCACTTCCAAATAAATGTGACCTATGGAGAAGGGTTGCCCAAAAGTCTGAAAGCCCCAGAAGATGCCCCATCTCCTGCTAATGCTGTTGCTGGAGATGATGATTCAGCACCGGACACCATTGTCCCTTCCAACTTCAACCATCCCAAAACAGAAGAAACTGATGATGATGACAAAGCTAGTGACAAACAAAACTCTACTTCTTTCTCAGTTTCACTGTCTGCACAACTTCACCTTGTCCTATTAGGAACCCTACTTTTCTTCTTTTGA 705 0.4397 MKQGRGRTSFHPISSILSSLLLFLSLSGSAHAYKNYTVGDSLGWFDNTENSNVNYQKWADTKKFTLGDFLIFNTDTNHSVVQTYNFTTYKECDYDDAQDKDTTQWSASDPSNTQTHPVTVAIPLMKEGTTYFFSGDYDGDQCRSGQHFQINVTYGEGLPKSLKAPEDAPSPANAVAGDDDSAPDTIVPSNFNHPKTEETDDDDKASDKQNSTSFSVSLSAQLHLVLLGTLLFFF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00613 234 Gene3D - 32 154 IPR008972 -
Vimu1g00613 234 MobiDBLite consensus disorder prediction 194 208 - -
Vimu1g00613 234 Pfam Plastocyanin-like domain 44 146 IPR003245 GO:0009055
Vimu1g00613 234 SUPERFAMILY Cupredoxins 34 152 IPR008972 -
Vimu1g00613 234 CDD Phytocyanin 34 152 - -
Vimu1g00613 234 ProSiteProfiles Phytocyanin domain profile. 34 154 IPR003245 GO:0009055
Vimu1g00613 234 PANTHER BLUE COPPER PROTEIN 33 189 IPR039391 GO:0009055
Vimu1g00613 234 MobiDBLite consensus disorder prediction 159 210 - -
Vimu1g00613 234 FunFam Early nodulin-like protein 18 33 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00613 Vimu-Chr1 3920021 3921592 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00613 13 204 Phytocyanin Superfamily AT1G08500 61.026 4.69e-85 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00613 - - gmx:100499721 364.385