Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00598 ATGTCAATTTTGAGAGGAATTTGTGTGCTGAGAGTGGGAGTGGCAACTCCAAAACCTTACCTTCTTCCCTCAATCTTCTCATCATCCTTCAATATTCATACCCTCTCACATACCACTTTTGCCAGAACCTTTCGTTTCCACCCACCTTCAATTCCTCTTTCATCCTTTGTTCCCCTCATACCTCCCAAAGCAGCAGGTGGTAGGCCAAGGGAACTCTTGGTGCAGCATTTGTTGGTCAAAGAAGATGACCAGAAGCTTCTGTTGGATCTTCTGCAAAAAATCTCTTCAGGTGAAGATTTGAGTGATCTTGCTGTGGAATATTCACTTTGCCCATCCAAAGAAGAAGGAGGAATGCTTGGATGGGTCAAAAAGGGTCAAATGGATACAGATATAATTACTATAAACTTTCTCTGGGTAGGTGATAAAGGGGTTGAATTAAGTATTTGGCTATATGGTTCTGGAAAGGAAGCAGATGGGGTAGTTCCTGAATTTGAGGAGGCTGCGTTCAGTGCACCTTTAAACAAAGTTGTAAAGTGCAAAACCAAATTCGGATGGCACCTGCTGCAGGTTTTATCTGAAAGCTCACTAGCGATGTCTGATGCAATTAGTCAGCACCACTCATTGGAGGAAGAATCAATTCTTCAAGACATTCAACCTCATGAGCTGCATGGGAAAATTCAAGATCCCAATTTTTTGGAGGCGGCACAGCTAATTGACGTTCGAGAGCCTGAAGAAGTGGCCAAAGCATCTTTGCCAGGATTTACTGTTCTTCCCCTCCGACAATTTGGAAGCTGGGGGCCTGAAATAACTAAAAAACTTGACCCTGAAAAGGATATATACGTTATGTGTCATCATGGCATGCGGTCATTACAGGTTGCCAAATGGTTGCTGTCACAGGGTTTCAGGAAAGTATACAATGTTTCTGGGGGAATTCATGCCTATGCTGTTCAGGTTGATCCATCAGTACCCACATACTGA 978 0.4335 MSILRGICVLRVGVATPKPYLLPSIFSSSFNIHTLSHTTFARTFRFHPPSIPLSSFVPLIPPKAAGGRPRELLVQHLLVKEDDQKLLLDLLQKISSGEDLSDLAVEYSLCPSKEEGGMLGWVKKGQMDTDIITINFLWVGDKGVELSIWLYGSGKEADGVVPEFEEAAFSAPLNKVVKCKTKFGWHLLQVLSESSLAMSDAISQHHSLEEESILQDIQPHELHGKIQDPNFLEAAQLIDVREPEEVAKASLPGFTVLPLRQFGSWGPEITKKLDPEKDIYVMCHHGMRSLQVAKWLLSQGFRKVYNVSGGIHAYAVQVDPSVPTY 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00598 325 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 160 325 - -
Vimu1g00598 325 Pfam PPIC-type PPIASE domain 158 192 - -
Vimu1g00598 325 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 69 192 IPR000297 GO:0003755
Vimu1g00598 325 SMART rhod_4 217 320 IPR001763 -
Vimu1g00598 325 Pfam Rhodanese-like domain 220 315 IPR001763 -
Vimu1g00598 325 Pfam PPIC-type PPIASE domain 82 131 IPR000297 GO:0003755
Vimu1g00598 325 Gene3D - 205 322 IPR036873 -
Vimu1g00598 325 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 212 323 IPR036873 -
Vimu1g00598 325 SUPERFAMILY FKBP-like 68 132 - -
Vimu1g00598 325 ProSiteProfiles Rhodanese domain profile. 231 323 IPR001763 -
Vimu1g00598 325 Gene3D - 69 196 IPR046357 GO:0003755
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00598 70 325 Sulfurtransferasese or Rhodanese AT5G19370 53.125 4.22e-90 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00598 - - gmx:100803404 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00598 1 3799996 3803386 Vimu1g00598 1 3799996 3803386 ECH