Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00589 ATGGAAAAGAATGTTGGTGAATCCTTGGTTTTTCCACCATCACCTAGCCCTCCCCAGACACCAAACATTCCTAGCTTGACAGAACCAAATGAAGAAATAGAACCAGAATCTGCCATGGTTGAAACTGCTGAAAGTTCACTTAACTCAGAGAATGAGCCTAATCCAACCATGGAGTTCCCTTTCTCATCCACTGATGATGAAAACTGGGAATATCTAAAACCCATAATCATGATTGTTCCTGCTGGGGAAGACATCGTGAGTACCATCCTCGACTATGCTCGTGACCAAGATGTCAGCATCATGGTGCATCATGCTTCAGGTCCTATATCTGAAGTTCACATAAGAAACCCTTTGTCCCCTTCCAATGATTCTACCTTTCAAGGAAACATGCACATGTTTTTTCTCTCAGGTGTTTACACCAAATGTCTCTCACCTTTACCACCCAAGAACGTTCCCTTCTCCTTCTTCAACATTCAATTCTTCAGGGAACACGTTCCTCAAGTCTATGGTGGCCTTGTCGGAAACAAACTCATTGCTGCACAAGCTGTGATGGTCACTGCTACTGTCTTCAAGGAGCATGACTACTACGAGTACAATGGTACCGTGACTCATATCACTGCTCCAAATGTTCAACCTTCCATTGTCAGTAATGATCCTGATGCAACCACCACCGTCACCACCACCGACAACAACAACACAGTCCATCAAAATGGATTCCTCAGAGGAGATTCAGTCTCATATGAAAACCACCCAACCAATCTTGGAGATTATTACTAG 777 0.4376 MEKNVGESLVFPPSPSPPQTPNIPSLTEPNEEIEPESAMVETAESSLNSENEPNPTMEFPFSSTDDENWEYLKPIIMIVPAGEDIVSTILDYARDQDVSIMVHHASGPISEVHIRNPLSPSNDSTFQGNMHMFFLSGVYTKCLSPLPPKNVPFSFFNIQFFREHVPQVYGGLVGNKLIAAQAVMVTATVFKEHDYYEYNGTVTHITAPNVQPSIVSNDPDATTTVTTTDNNNTVHQNGFLRGDSVSYENHPTNLGDYY 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00589 258 MobiDBLite consensus disorder prediction 41 56 - -
Vimu1g00589 258 Pfam Plants and Prokaryotes Conserved (PCC) domain 73 191 IPR005175 -
Vimu1g00589 258 ProSiteProfiles PPC domain profile profile. 69 213 IPR005175 -
Vimu1g00589 258 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 49 199 IPR014476 GO:0003680
Vimu1g00589 258 Gene3D - 73 208 - -
Vimu1g00589 258 SUPERFAMILY AF0104/ALDC/Ptd012-like 70 196 - -
Vimu1g00589 258 MobiDBLite consensus disorder prediction 1 56 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00589 72 201 AT-hook Motif Nuclear Localized (AHL) Family AT1G14490 28.030 1.40e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00589 - - vun:114195162 327.791