Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00498 ATGGAACAAGAAGATAACACCCCAAAGCACACTATCATACCCACATTCCTCAGAAAACCTTCAGACGACCAGGCCAACTCCGCCGTCTCCTCTCACAAATCTTTGCATGTTTTCCGCCACAGCAGGAGGCGGTGTAGGAAGGAACTCACTGCGAAAGAGCCTGCCAAGGAAGGTGATGAAGATGAGGAGAAAGAAAAAGAAGAAGATGAAGATGGTGGTGACGTTGATGACAGAGAAGAGATAGAGAGGAAGATTCATGCATTGCAGAGGATTGTGCCTGGTGGGGAGTCATTAGGGGTGGACAAACTCTTTGATGAAACTGCTGGCTATATTCTGGCCTTGCAGTACCAAGTCAAAGCCTTGAGGGCTCTCACCGGTTTCTTTGAGAAGTTGGAGAAGGAGAAGACAAAGTTTGGAGAATTGATTTTGGGGAAGTGTTGTAGGAATCTTAAGGTGTTGGATGACGATGATGATGATGATCTGGATGGGCCAGTCGTATTTGGTCTTAAAATCTGGATGAGATCAGAGGTTTTTAAAGTAACATGGCACATACACATGTTGGCATTGGTCACTTTCTCTTGTGAAAACTTTGGTTTGGGGATTTTGGAATAG 612 0.451 MEQEDNTPKHTIIPTFLRKPSDDQANSAVSSHKSLHVFRHSRRRCRKELTAKEPAKEGDEDEEKEKEEDEDGGDVDDREEIERKIHALQRIVPGGESLGVDKLFDETAGYILALQYQVKALRALTGFFEKLEKEKTKFGELILGKCCRNLKVLDDDDDDDLDGPVVFGLKIWMRSEVFKVTWHIHMLALVTFSCENFGLGILE 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00498 203 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 37 128 IPR044660 GO:0006355
Vimu1g00498 203 CDD bHLH_AtIBH1_like 79 125 IPR044549 GO:0006355
Vimu1g00498 203 MobiDBLite consensus disorder prediction 20 34 - -
Vimu1g00498 203 MobiDBLite consensus disorder prediction 60 76 - -
Vimu1g00498 203 MobiDBLite consensus disorder prediction 1 78 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00498 78 124 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 46.809 1.81e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00498 - - gmx:100817215 170.244