Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00452 ATGATTGATTTTCAGGCTGGTGGTTCTCTACAATCTGCGTCATGGAAGGTTGGTGTTGGTGCTACTTTTACAAATGATTCCTCTAGTTATTGTTGTTGTGTTTGTCGATTCAGATATGTAATGGATCATGACAAGAAGAAAGCCCCTGAGTTGCGACAGCATGTTACCAATGCTGGGTGGCCTCCCTTCACAAATTTCCTATGGCTATTGCCAAAAGATTTGCCACGCCATTCCACCATGGTGGCCATGTTGCCACCATTTAACAACATTGTTTCAGAATTTGTTTCGGAATCTGAGGAATTCTTTATGGGATTGGAAGAAGGAGTTATAGCTGCAACAGTAGCAAGTGATCCACAGAAATATTGTGAAGCTTTTCTTGGGAAGCCAAATGCAGAATATTGTAACTGGATTCTTGACTCAGAGAAGTGGGGAGGTGCAATCGAACTTGCAATATTAGCAGATTATTATGGACGTGAAATTGCAGCATATGATATCCAGACAACTCGATGTGATTTGTATGGTCAGGAAAGTAACTACTCTGAAAGAGTGATGCTAATTTATGATGGTCTCCACTATGATGCATTAGTGATGTCTCCCGTTGAGGATGCTCCTGAAGAGTTTGATCAGACCATATTTGCAGTTCAGCCGAACAGAAGCATTGGACCTGTGGAGAGGCTTGCTCTAAATTTTGTGAAGGACCAGCAGAGGAAACGGAGTTACACTGACACTTCCAAGTTCACTCTGCGCTGTGGGGTATGCCAAATTGGAGTAGTTGGCCAGAAGGAGGCAATTGAGCATGCACAGGCCACTGGTCATGTTAACTTTCAAGAGTATAGATGA 840 0.4286 MIDFQAGGSLQSASWKVGVGATFTNDSSSYCCCVCRFRYVMDHDKKKAPELRQHVTNAGWPPFTNFLWLLPKDLPRHSTMVAMLPPFNNIVSEFVSESEEFFMGLEEGVIAATVASDPQKYCEAFLGKPNAEYCNWILDSEKWGGAIELAILADYYGREIAAYDIQTTRCDLYGQESNYSERVMLIYDGLHYDALVMSPVEDAPEEFDQTIFAVQPNRSIGPVERLALNFVKDQQRKRSYTDTSKFTLRCGVCQIGVVGQKEAIEHAQATGHVNFQEYR 279
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00452 279 SUPERFAMILY Cysteine proteinases 120 196 IPR038765 -
Vimu1g00452 279 FunFam ubiquitin thioesterase OTU1 87 244 - -
Vimu1g00452 279 Gene3D - 97 244 - -
Vimu1g00452 279 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 109 277 - -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00452 109 279 C2H2 Transcription Factor Family AT1G50670 78.363 9.65e-99 286
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00452 K13719 - gmx:100793701 336.65