Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00414 ATGCATTGTGAAGCATGTGGAGAAAATGCAACATTTACACAGCAGAAATTCCAAGAATTTGATTACGAGAAGTTCACTGAGACTCCCTTGCGTGTGCCTCCTTTGAAGTTACATCTACTTCCGAGTGAATCTAGAATCAGCAGCAAGGAATACAGTGAAATAATTCTAAAGAAGGAACCACATGTGCTGGTTGATGTTAGACCAGCTCACCATTTCAAGATTGTATCTCTACCGAAGTCCCTGAACATTCCACTCTCAACGTTAGAGTCTCGGCTACCTGAAATATCATCAGCTTTGAAGAAAGAGGAGGACAGTGGTCTAGTTTCTGGATCAGGTGCACAATTGTATGTAGTGTGCAGAAGGGGAAATGATTCTCAAAGGGCTGTTCAGTGTCTTCACAAAATGGGTTTCACATCTGCCAAGGACATTGTTGGGGGCTTAGAGTCTTGGGCATACAACGTGGATCCCAAGTTCCCTACATATTAG 486 0.43 MHCEACGENATFTQQKFQEFDYEKFTETPLRVPPLKLHLLPSESRISSKEYSEIILKKEPHVLVDVRPAHHFKIVSLPKSLNIPLSTLESRLPEISSALKKEEDSGLVSGSGAQLYVVCRRGNDSQRAVQCLHKMGFTSAKDIVGGLESWAYNVDPKFPTY 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00414 161 Pfam Rhodanese-like domain 49 151 IPR001763 -
Vimu1g00414 161 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 40 159 IPR036873 -
Vimu1g00414 161 ProSiteProfiles Rhodanese domain profile. 57 159 IPR001763 -
Vimu1g00414 161 Gene3D - 44 161 IPR036873 -
Vimu1g00414 161 FunFam Adenylyltransferase and sulfurtransferase MOCS3 44 161 - -
Vimu1g00414 161 PANTHER FAD-DEPENDENT OXIDOREDUCTASE 41 158 - -
Vimu1g00414 161 SMART rhod_4 47 156 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00414 Vimu-Chr1 2503387 2504043 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00414 2 161 Sulfurtransferasese or Rhodanese AT5G55130 61.111 3.51e-67 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00414 K11996 - gmx:100801820 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00414 1 2503387 2504043 Vimu1g00414 1 2503387 2504043 ECH