Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00343 ATGCAGGCCTTATGGATCTCCTTGAAGGATAATGTCAAATGTGGAAACAAGATCAACGATGTAATCAAGCAGCAAACGAAATGCAGCAAGGGAAGTGTCTGTGTTTCAGAATGGGAGAAAACAAATAGCTATAATAGATCTCTAATGCTAACCCCAACTAGCCCAGTAGTTTCAAGACCAAGCAATACACTGGGAAGGCTTCATGAACTGGGTGTTGGAGACCCGTCAAGAAAAATTGTGGAAATGATCTTTCAAAAAGCTTGGCTCAACACATCAAAGCCACTGAAAAAGGTTAGAACAGTCCTCAGGGTGAGCTACTCAGAAGAAGTCCTTCAAAGGTTTGAAAAATATAGAGAAAACGTGAAGAAGGTGGCCTCTGAGCAATTTCCAAGGCATCCAAGGAGCACAGTTGATGGGAATGAGCTGTTGCGGTTCTATGGTACTACAGTGAGATGTTTCCATGGGAAATCTACGAAGAGAGTTCATGATCTCTGTAAAGATCCATCTTGTTATCTATGCCAAATAATTCAATTTAATTTCAAGACACAATACGCCCACTTGAATACTAGTGACAAAGAGTTGAGCAACGGAGCAACTGCCACTGCCAGGGTACATAGCGTGAAAAAAGCTGCAATAATTTGCAGGATAATTGCTGGAATTCCAGAAAATGAAGTTGATGGTGAATATGAAGGACCTGGCTCAACTGGGTTAGGAGAAATGCAGTTTAGCTTAGAAAAATTTGTAGTAAAGAATCCCAGTTCTATTCTTCCTTGTTTTGTAATAATTTTCAACTAA 795 0.4013 MQALWISLKDNVKCGNKINDVIKQQTKCSKGSVCVSEWEKTNSYNRSLMLTPTSPVVSRPSNTLGRLHELGVGDPSRKIVEMIFQKAWLNTSKPLKKVRTVLRVSYSEEVLQRFEKYRENVKKVASEQFPRHPRSTVDGNELLRFYGTTVRCFHGKSTKRVHDLCKDPSCYLCQIIQFNFKTQYAHLNTSDKELSNGATATARVHSVKKAAIICRIIAGIPENEVDGEYEGPGSTGLGEMQFSLEKFVVKNPSSILPCFVIIFN 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00343 264 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 53 263 - -
Vimu1g00343 264 SUPERFAMILY ADP-ribosylation 67 264 - -
Vimu1g00343 264 Gene3D - 65 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00343 Vimu-Chr1 2020895 2021957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00343 69 262 C2H2 Transcription Factor Family AT5G54630 37.850 1.02e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00343 - - gsj:114384928 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00343 1 2020895 2021957 Vimu1g00343 1 2020895 2021957 ECH