Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00325 ATGAATGCGAATGGTGAGAATTGGAGTATGGGTCAGAGACAGTTGGTCTGCCTTGGCAGGGTGCTGCTTAAGAAAAGCAAGGTTTTGGTTCTTGATGAAGCCACTGCATCAGTCGACACAGCTACGGATAATTTGATTCAGCAAACTCTCAGGCAACATTTCGCTGACTCCACAGTTATTACCATTGCACACCGAATAACTTCAGTTCTTGACAGTGATATGGTTCTGCTTCTTAGTCAAGGACTTATTGAGGAGTATGACACCCCAACAAAATTGCTAGAGAATAAGTCTTCATCTTTTGCTCAACTTGTTGCTGAGTATACCATGAGGTCCAAGTTCAGTTTTGAGGAATCTGATGATCACTGA 366 0.4262 MNANGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFADSTVITIAHRITSVLDSDMVLLLSQGLIEEYDTPTKLLENKSSSFAQLVAEYTMRSKFSFEESDDH 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00325 121 Gene3D - 1 120 IPR027417 -
Vimu1g00325 121 FunFam AGAP012735-PA 1 109 - -
Vimu1g00325 121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 103 IPR027417 -
Vimu1g00325 121 Pfam ABC transporter 4 36 IPR003439 GO:0005524
Vimu1g00325 121 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 4 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00325 Vimu-Chr1 1922033 1922607 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00325 5 104 Calmodulin-binding Proteins AT2G36910 32.673 1.94e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00325 - K05666 gmx:100811245 205.297