Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00316 TTGAAGAACAGAGAAGACAAGGTGAGGGTAGAGATTGGGTCACTCCGAGAAAAGCTTGACTTGGAGAGGCACAATAGTATTGAAATAGAAAAAAGTTTGAAAATTAGAGACGAGCAATGTAAAAAGGGGAAGCAAGCCCAGGAGAATTATGAGCTGTTGTTGAAGAGAATGAAACAAAGTGGGTTGGATATGGATGAGTTAAAGAAAAGGAACGTTGCTTTAGAAGGTGAAGTTTGTGAGTTGAAGAAAAAAATGGTAGAAAATGTCAAACATGTGACTGAACTAAGAACCGAGATCAGTAAGTTGGAGGAAGAGAAGGTTCGGGACAAGAATGCTCTCAACATGAAGAACACTGAATTGAAGGAAGAAATTAAGAAGAATTTGGCTGAGATAGAGAGGCTGAGGACTGAAAATGATAAATTGACAGATGAGAAGCTCGAACGCAAGACAGCATTTGAGTCTTTGGAGAGGAAATATGGTGAACTCAGTGCAAGTGTTCTGAAGTTAGAAGATGATGTAAAGCTTTTGATGAGTGAAGGTGCCTCTGATTGTGGGAACACTGAACAAGAGCCTAATACTGGAGTTTCTTTTGCTGTCAAAGCTGAAGAGGTTTTCGATGACTATGAGCTTGAAAATGACACTGGGGAGCCTGTTCCTTCCCCAAAGACTAAAGAAACTCATATAAAAAAAGGGTACAAGGATGTTGCATCAGGGTTGTTTGCACACTTGGATGAGATAAGAAATATGCAGCAACTGAAATTGAGTTTCCTTGTTTCTAATGAGAAGCAATCTGGTTTTTTGTCATCAGCCAATGAAGCACCATGCTTGGAATTTCTGAGCCAACTCGCTAGCATGGGGTTGGATCTTCACATTCTTCCTTTCTTCATCTTAGTGTTGATGGTAATCAACATATTTTGGAGATCAAAAACCAGGAACTCAAACTCTAAGTTGCCACCAGGGCCAAGGAAGCTACCCCTCATAGGGAACATACACGAAATTGGAAGTCAGACTCATAGGTCCTTAGCAACATTGGCACGTCAACATGGTCCTCTCATGTATATGCAGCTTGGTGAACTTTGCTGCATAGTTGTATCTTCAGCCGAAATGGCCAAAGAAGTGATGAACACACATGATATCATCTTTGCAAATAGGCCTAGTGTGCTTGCTGCTGATGTTATCACTTATGGTTCTAAGGGCATGAGCTTCAGCCCCTATGGATCTTATTGGAGGCAGATGAGAAAGATTTGCACCATGGAACTGCTAACACAAAAGCGCGTTGAATCCTTCAGATCCATCAGGCTACAAGAGTTGTCAAATTTTGTCAAGGAGATATCTTTAAGTGAAGGGTCGCCAGTTAATCTCACTGAGAAGATGAATTCTTTGTCATATGGACTTATATCTCGGATTCTTTTTGGTAAAAAATCTGAAGACCAAGAGGCTTATGTGGAACATATGAAGGGTGTCAATGAGACGGTTGGAGGGTTTTCTGTCTCTGATCTGTATCCTTCTGTTGGACTTCTTCAAGTTATTACTGGGATTAGGACTAGAGTTGAGAAGATTCATCAAGGAATGGATAGGGTACTTCAGAACATTGTTAGCGATCACAGAGACAAAACTTTGGGGGCTTTTGGTGAAGAAGATAGGGAAGATCTAGTTGATGTTCTTTTAAGGCTTCAGAAAAATGGTGATCTCGAACACCCCCTATCAGACACTGTTGTCAAAGCAACCCTTTTGGACATATTCAGTGCTGGAAGCGACACTTCATCAACAATTATGAATTGGGTAATGTCAGAGCTGGTGAAGAACCCTGAGGTGATGGTGAAAGTGCAAAGTGAGGTAAGAAGAATCTTTGATGGAAAAGGGTATGTGGATGAAACAGATATTCATGAGCTGAAGTACTTGAGAGCTGTTATCAAAGAAACATTGCGTATGCATCCACCTGCTCCATTTCTGCTTCCAAGGGAATGCAGTGAGAAATGTGAGATCAATGGGTACGAGATACCAGCCAAAAGCAAAGTGATTGTCAATGCATGGGCCATTGGGAGGGATCCGAATCATTGGAATGAAGCTGAGAAATTTTATCCAGAAAGGTTCCTTGAAAGTTCAATTGATTACAAAGGTGGTGAGTTTCAGTTCATTCCATTTGGAGCTGGAAGGAGGATATGCCCTGGAATCAATCTTGGCATTGTCAATGTTGAATTTTCACTTGCAAATTTGCTTTTTCATTTTGATTGGAAGCTGCCTCAAGCGATCAATAGGCCTCAAGACCTTGATATGACTGAATCCTTTGGGTTGACAGTTAAAAGGAAACATGATTTGGTGTTGATTCCTATCTCTCACCACTCAGCTAAAAACTAA 2358 0.4088 MKNREDKVRVEIGSLREKLDLERHNSIEIEKSLKIRDEQCKKGKQAQENYELLLKRMKQSGLDMDELKKRNVALEGEVCELKKKMVENVKHVTELRTEISKLEEEKVRDKNALNMKNTELKEEIKKNLAEIERLRTENDKLTDEKLERKTAFESLERKYGELSASVLKLEDDVKLLMSEGASDCGNTEQEPNTGVSFAVKAEEVFDDYELENDTGEPVPSPKTKETHIKKGYKDVASGLFAHLDEIRNMQQLKLSFLVSNEKQSGFLSSANEAPCLEFLSQLASMGLDLHILPFFILVLMVINIFWRSKTRNSNSKLPPGPRKLPLIGNIHEIGSQTHRSLATLARQHGPLMYMQLGELCCIVVSSAEMAKEVMNTHDIIFANRPSVLAADVITYGSKGMSFSPYGSYWRQMRKICTMELLTQKRVESFRSIRLQELSNFVKEISLSEGSPVNLTEKMNSLSYGLISRILFGKKSEDQEAYVEHMKGVNETVGGFSVSDLYPSVGLLQVITGIRTRVEKIHQGMDRVLQNIVSDHRDKTLGAFGEEDREDLVDVLLRLQKNGDLEHPLSDTVVKATLLDIFSAGSDTSSTIMNWVMSELVKNPEVMVKVQSEVRRIFDGKGYVDETDIHELKYLRAVIKETLRMHPPAPFLLPRECSEKCEINGYEIPAKSKVIVNAWAIGRDPNHWNEAEKFYPERFLESSIDYKGGEFQFIPFGAGRRICPGINLGIVNVEFSLANLLFHFDWKLPQAINRPQDLDMTESFGLTVKRKHDLVLIPISHHSAKN 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00316 785 PANTHER CYTOCHROME P450 71B11-RELATED 301 778 - -
Vimu1g00316 785 CDD CYP71-like 347 773 - -
Vimu1g00316 785 Pfam Cytochrome P450 318 764 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g00316 785 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 715 724 IPR017972 GO:0005506|GO:0016705
Vimu1g00316 785 PRINTS P450 superfamily signature 636 647 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g00316 785 PRINTS P450 superfamily signature 713 722 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g00316 785 PRINTS P450 superfamily signature 583 600 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g00316 785 Coils Coil 57 77 - -
Vimu1g00316 785 Coils Coil 85 172 - -
Vimu1g00316 785 Gene3D Cytochrome P450 303 778 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g00316 785 PRINTS E-class P450 group I signature 369 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g00316 785 PRINTS E-class P450 group I signature 345 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g00316 785 PRINTS E-class P450 group I signature 722 745 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g00316 785 PRINTS E-class P450 group I signature 592 618 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g00316 785 PRINTS E-class P450 group I signature 712 722 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g00316 785 PRINTS E-class P450 group I signature 635 653 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g00316 785 PRINTS E-class P450 group I signature 676 700 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g00316 785 PRINTS E-class P450 group I signature 572 589 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g00316 785 PRINTS E-class P450 group I signature 461 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g00316 785 SUPERFAMILY Cytochrome P450 318 776 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g00316 785 FunFam Cytochrome P450 71D8 310 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00316 Vimu-Chr1 1877073 1885243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00316 294 778 Cytochrome P450 AT5G25120 40.891 4.69e-133 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00316 - - gmx:100776770 817.379