Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00173 ATGGCTTACTATAGTGATATATGTGTTGGAGCAATTGCGTGCCGGCTAGAGAAGAAGGAAGGAGGGGGGCAAGTTCGGGTTTACATAATGACATTAGGCGTTTTAGCACCTTACCGTGGACTTGGTATTGGAACAAAGCTGTTAAATCATGCTCTTGATCTTTGCTCCAAGCAAAACATTTCTGAGGTGTACTTGCATGTGCAGACAAACAATGAAGACGCCATAAACTTCTATAAGAAATTTGGGTTTGAAATTACAGAAACAATCCAGAACTATTATACAAACATTACACCGCCAGACTGCTATGTTCTCACAAGAAATAACATTATAGCCAGTTATTTGAGGGGAAGTGATCAGAGATTGTTGCATTGTTTTATGGGTTTTGCCATGGATGTATTACACTAA 405 0.3926 MAYYSDICVGAIACRLEKKEGGGQVRVYIMTLGVLAPYRGLGIGTKLLNHALDLCSKQNISEVYLHVQTNNEDAINFYKKFGFEITETIQNYYTNITPPDCYVLTRNNIIASYLRGSDQRLLHCFMGFAMDVLH 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00173 134 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 109 IPR000182 GO:0016747
Vimu1g00173 134 Gene3D - 1 107 - -
Vimu1g00173 134 FunFam Putative n-alpha-acetyltransferase 50 1 109 - -
Vimu1g00173 134 Pfam Acetyltransferase (GNAT) family 6 83 IPR000182 GO:0016747
Vimu1g00173 134 CDD NAT_SF 2 66 - -
Vimu1g00173 134 PANTHER N-ALPHA-ACETYLTRANSFERASE 4 105 - -
Vimu1g00173 134 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 2 105 IPR016181 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu1g00173 Acetyltransf_1 1.3e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00173 K20793 - gmx:100499961 219.935