Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00163 ATGAGCAAAACTCACCCACATTGTCGACGTGACATCACGTGGATTTTACTCTTTCTGCTTCTTGCTCTTCTTCTTCCGTGTGTGGTTGATGGTGACGGCAATGGCGATCAGTGTAAATGCAAAAGCGATAAAGAAGAAGGTGGAGAAAACGTTGACAAGAATTTGGCCAAGAAATACAAAATCGGAGCTCTTGTTTCGATTCTTGTTGCAAGTGCAGTTGGCGTCAGTCTTCCATTGCTCAGTAGAATTTTCCCGGCCTTGCATCCGGAGAAGGACTTTTTCTTCATGGTGAAGGCCTTCGCGGCTGGGGTCATATTATCCACAGGTTTCATTCATGTATTGCCAGATGCTTTTGAGAAGCTGACACCTCCCAGTCTCTGTAATCATCCCTGGGACGATTTTCCCTTCGCCGGATTTGTGGCAATGGTGGCAGCCATCGGAACGCTTATGGTTGATTCTCTTGCGACTGCGTATTTTAAAAAGTCCACGCTAAGCGCCATGGACCGAGTTGCTGACGAAGAAGATCTGCATGAACATAATCGCCATGCAACTCATCATTCTCATTCTCATTCTCACGCTTCCATGTCTTCTCCTTCCACGAACCTCCTTCGCCATCGCGTTATTTCTCAGGTGCTGGAGCTGGGAATTGTGGTGCATTCTGTGATAATAGGGATCTCTCTGGGTGCATCTGAAGATCCTAAAACGATAAGACCTCTTATTGCTGCTTTAACTTTTCACCAATTTTTTGAAGGCATGGGGCTCGGTGGTTCCATCTCACAGGCAAAATTCAAGAGAGGAGCAGTTATAGTTATGGCATTATTCTTTTCACTGACGACACCTGTTGGGATTGCAATTGGTATGATAATCAGTGACAATTACAAGGAGGAGAGTTCAACAGCTCTAATTGTGGAAGGTATTCTTAATGCAGCATCAGCAGGTATCTTAATTTACATGTCACTAGTGGACCTTCTTGCGCCTGATTTAATGAATCCAAAGATCCAATCAAGTAGCACACTTCAGATTGGAGTTAACACATCTTTGCTTATTGGGGCTGGTTGCATGTCACTTCTTGCCAAATGGGCCTAG 1086 0.4484 MSKTHPHCRRDITWILLFLLLALLLPCVVDGDGNGDQCKCKSDKEEGGENVDKNLAKKYKIGALVSILVASAVGVSLPLLSRIFPALHPEKDFFFMVKAFAAGVILSTGFIHVLPDAFEKLTPPSLCNHPWDDFPFAGFVAMVAAIGTLMVDSLATAYFKKSTLSAMDRVADEEDLHEHNRHATHHSHSHSHASMSSPSTNLLRHRVISQVLELGIVVHSVIIGISLGASEDPKTIRPLIAALTFHQFFEGMGLGGSISQAKFKRGAVIVMALFFSLTTPVGIAIGMIISDNYKEESSTALIVEGILNAASAGILIYMSLVDLLAPDLMNPKIQSSSTLQIGVNTSLLIGAGCMSLLAKWA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00163 361 NCBIfam ZIP zinc/iron transport family 49 361 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vimu1g00163 361 MobiDBLite consensus disorder prediction 179 198 - -
Vimu1g00163 361 Pfam ZIP Zinc transporter 59 358 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vimu1g00163 361 PANTHER ZINC/IRON TRANSPORTER 57 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00163 Vimu-Chr1 925088 927435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00163 38 361 Inorganic Solute Cotransporters AT3G12750 55.522 5.05e-121 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00163 K14709 - rcu:8279565 410.223