Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu1g00136 | ATGAATGTCCAGCTTGCCTATCGTAGGTTCTTCATGAATCTGCTATTCCTTGCATTCACATTCATCCTATTACATGGATCATCAACAGCAAGAGAAGAAGCCTCCCGACATGATGACGATGATGTCGTAAATATCGGTGCCATATTCACATTGCAAACTATAAACGGCAAAGTTTCCAAAATTGCCATCGAAGCAGCTGAGCAAGACGTAAACTCCGATCCCCGCATCCTGGGTGGACGTAGATTGTCCATAAACATCCATGATTCCAACTTCAGTGGTTTTCTTGGCTTCATTGGGGCCCTCAAGTTCTTGATGACCGACACATTGGCTATAATCGGTCCACAAACCTCAGGAATGGCCCATGTGCTTTCGCATCTCGCAAATGAGCTCCATGTTCCCCTACTCTCCTTCACGGCTCTGGATCCGACCCTAACACCTCTCCAGTATCCTTATTTTGTTCAAACAGCGCCCAGCGATCAGTTCCAGATGACTGCAATTGCGGACATGATTAGTAATTATGGTTGGAGAGAAGTCATAGCAATATTCAATGATGATGATCCGGGTCGAAATGGGGTAACTGTTTTGGGGGATAAACTTGCAGAAAGGGGTTGTAAGTTGTCTTACAAAGCAGCACTGCCTCCTGAACCAAACGCCACTCCAAGCTTTATTACCGGTCAGTTAGTGAAGATTAAGAGCATGGAGTCTCGAATAATCGTTTTACACACCTTCGCCAAAACTGGTCTCCTGGTTTTTGACCTGGCTCAAAAACATGAAATGATGTCCAAAGGGTATGTCTGGATAGCTACTGCATGGTTATCGACTGTTTTAGATTCATCTTCTGCTTCAAACACTTCTAATTCAGTTCTAGGAGCTCTTACCCTTCGCCCTCACACCCCTCAATCCTTAAAAAAACAGGCATTTATCTCAAGGTGGAAACACTTAAGTAATGGCTCAATTGGGTTAAATCCATACGGACTCTATGCGTATGATTCTGTGTGGATGATTGCTCGGGCACTGAACTTATTCTTTGATCAGAAAGGAAAGGTTTCATTTTCCAACAAAAATTTAAGTAGAACGGGGGAAGAGAATCTGAATCTGGGTGCTTTGAGCGTTTTTGAGGGAGGGAAGCAACTACTTGATAACATATTGCGCATTAATATGACGGGATTGACTGGACCTATTCACTTTGGTTCAGATAGATCTCCTCCACATCCATCATTTGAAATCATTAATGTAATTGCCACAGGTTTTCGGAGCATCGGTTACTGGTCTAATTACTCTGGACTCTCCGTAATCACCCCTGAGAAACTTCAGTTGAAGCCTGCCAATCGTTCAATTTCAAGCCAGCATCTAAAGCCTGTCATATGGCCTGGAAATACCATAGAAAGGCCTCGTGGATGGGTTTTCCCACATAATGGGAGGCAACTGAGAATTGGAGTTCCCAACAGAGTTAGTTATAGAGCCATAGTCTCACAAATAAATGCCTCCAATGCAGTTCAAGGATATTGCATAGAGATATTCCGAGCTGCCATAAAACTTCTTCCATATGCAGTTCAGTATAAGTTCGTTCTATTTGGAGATGGAGAAAATAACCCAAGCTACTATGATCTTGTCAACATGATTACTCTTGATGTTTTCGATGTTGCTGTAGGTGACATTGCTATCGTCACTGACCGAACAAAGATTGTGGATTTTACTCAACCATATATAGAGTCGGGGCTAGTTGTGGTTGCTCCGGTAAACAAATTGAAGTCGCATGCTTGGGCTTTCTTGCGACCATTTACTCCAATGATGTGGGGTGTCACTGCATTTTTTTTCCTTTTTGTTGGAACAGTGGTGTGGATTCTTGAACATAGAACAAACGATGACTTTCGGGGGCCGCCAAAGGAACAGATAGTTACGGTTCTTTGGTTTAGTTTCTCAACCATGTTCTTTGCGCACAGAGAAAACACAGTGAGTCCACTTGGTCGAGTTGTGTTGATTATCTGGCTTTTTGTGGTTCTGATAATCAATTCAAGCTACACTGCAAGCTTGACATCAATTCTGACAGTGCAGCAGCTGTCTTCACCCATAACAGGAATTGATAGCTTGATATCCAGCAATGAACGTATAGGATTCCAAGTAGGTTCGTTTGCTGCAAACTATCTAACCGAGCAACTCAACATCCCCAAACATAGACTTGTTCCTCTTGGCTCACCAGAAGAATATGCCATTGCCCTTGAAAGAGGAACAGTTGCAGCAGTGGTGGATGAAAGGCCTTATGTAGAACTATTCCTTTCAGACCACTGCGAATTCTCAATCAGGGGCCAAGAGTTCACCAAAAGTGGATGGGGATTTGCATTTCCTAGGGACTCTCCTTTTGCAGTTGATATGTCAACAGCCATTTTAACTTTATCTGAGAATGGTGAACTTCAGAGGATCCATGAAAAGTGGCTTTCAGAAAAGGCTTGTGCTCATCGCAGTAGTGAGAATGAACAACTTCAATTGAATAGCTTCAAGGGTCTGTTTCTAATATGTGGGATAACATGTTTCGTGGCGCTTTTGATATACTTCTTATCTATGCTACACCAGTTCAGCAAAAAATCCCCTATAAAAGCTGGTCCTTCAAATCGTGACAGCTCGCGTTCTGCACGCATCCAAACATTCCTGGATTTTGTGGACGAGAAAGAAGCTGTATCTCCCAGGAAATTAAAAAGAAAACTGGAACATATTTCATCAAATCGTTTGAGGAGCATATCAAAGAGCAGGAGTGACAGAGTACAGTAA | 2766 | 0.4277 | MNVQLAYRRFFMNLLFLAFTFILLHGSSTAREEASRHDDDDVVNIGAIFTLQTINGKVSKIAIEAAEQDVNSDPRILGGRRLSINIHDSNFSGFLGFIGALKFLMTDTLAIIGPQTSGMAHVLSHLANELHVPLLSFTALDPTLTPLQYPYFVQTAPSDQFQMTAIADMISNYGWREVIAIFNDDDPGRNGVTVLGDKLAERGCKLSYKAALPPEPNATPSFITGQLVKIKSMESRIIVLHTFAKTGLLVFDLAQKHEMMSKGYVWIATAWLSTVLDSSSASNTSNSVLGALTLRPHTPQSLKKQAFISRWKHLSNGSIGLNPYGLYAYDSVWMIARALNLFFDQKGKVSFSNKNLSRTGEENLNLGALSVFEGGKQLLDNILRINMTGLTGPIHFGSDRSPPHPSFEIINVIATGFRSIGYWSNYSGLSVITPEKLQLKPANRSISSQHLKPVIWPGNTIERPRGWVFPHNGRQLRIGVPNRVSYRAIVSQINASNAVQGYCIEIFRAAIKLLPYAVQYKFVLFGDGENNPSYYDLVNMITLDVFDVAVGDIAIVTDRTKIVDFTQPYIESGLVVVAPVNKLKSHAWAFLRPFTPMMWGVTAFFFLFVGTVVWILEHRTNDDFRGPPKEQIVTVLWFSFSTMFFAHRENTVSPLGRVVLIIWLFVVLIINSSYTASLTSILTVQQLSSPITGIDSLISSNERIGFQVGSFAANYLTEQLNIPKHRLVPLGSPEEYAIALERGTVAAVVDERPYVELFLSDHCEFSIRGQEFTKSGWGFAFPRDSPFAVDMSTAILTLSENGELQRIHEKWLSEKACAHRSSENEQLQLNSFKGLFLICGITCFVALLIYFLSMLHQFSKKSPIKAGPSNRDSSRSARIQTFLDFVDEKEAVSPRKLKRKLEHISSNRLRSISKSRSDRVQ | 921 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu1g00136 | 921 | Gene3D | - | 61 | 404 | - | - | |
| Vimu1g00136 | 921 | Pfam | Receptor family ligand binding region | 61 | 412 | IPR001828 | - | |
| Vimu1g00136 | 921 | SUPERFAMILY | Periplasmic binding protein-like I | 40 | 468 | IPR028082 | - | |
| Vimu1g00136 | 921 | Gene3D | - | 747 | 778 | - | - | |
| Vimu1g00136 | 921 | Gene3D | - | 158 | 429 | - | - | |
| Vimu1g00136 | 921 | SMART | GluR_14 | 477 | 814 | IPR001320 | GO:0015276|GO:0016020 | |
| Vimu1g00136 | 921 | Gene3D | - | 473 | 586 | - | - | |
| Vimu1g00136 | 921 | Gene3D | - | 587 | 722 | - | - | |
| Vimu1g00136 | 921 | Pfam | Ligand-gated ion channel | 814 | 842 | IPR001320 | GO:0015276|GO:0016020 | |
| Vimu1g00136 | 921 | Gene3D | - | 779 | 811 | - | - |
Showing 1 to 10 of 21 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu1g00136 | K05387 | - | gmx:100793969 | 1281.54 |
Showing 1 to 1 of 1 entries