Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04975 TTGGGCCTGGGCCTTGACTATGATCCAAGACTTCTGTTAACAGCTGGTAGACAGAGAGAGACGGTGGGTGAAGGTGGTATTGGAGCGGCAAGAAAAAGGATGAGGTGGTGCAGAGAGGTGTTCTCTGTGCGTGGGTCTGGGTCTGGATCGGGTGCTCATGCCATTGCGCTGTCACTCGCACCTATAGTTACTGCTTCCTTTTGCAGCAAAAGTCTTGTGTTGCCATTCCAAAATTCTCCTTTCAAATTCAAACTCACTGACTCATCTTCACTTGCTCTCACCCATCGTAAGCAGCTCCTACCCGCTGCACTGTCACTAACACAGCCCTCTACTGCAAGGGAGGACGATTTTGATTTTGTGGTCGTCAATTTCTACCATTTTGTGTTCATCCAAGACCCACAAGCCGAAGTCTTCAAACACCGTTCTTTCTTGGAATTGCAGGACCTCGACATCAATGGAAGAGTCTATGTGAATGAACAAGGGATTAATGCCCAGTATAGTGGACCATCAAAAGATGCTCTGGCGTATGTCAACTGGTTAAGACAGGATAACAGGTTTTCTGACATATTGGTTCAGATATCTCCATCAGAAAATGGACATACCTTTCCAGCATTGAAGTTGCGTTATAAGCCTTCATTGGTACAGTTTGAAGGTGGTATGTCACATCTTCCGTTGCTTGATCCTTCAATGCGTGCAATACCTTTATCACCAGCAGAATGGAAAGAAAGATTGGAAGCAGTCAATAAAACTGATCTTAGAGCAAAAGATTATCATGACAGAGATTTCATTCTATTGGATGTCAGAAATGGATTTCATGAGAAAAGTGAAACTGAAGGCCATGGTTATGAGTGGGATATTGGACATTTTCGTGGGACTCAACGACCTAGTGTGGACTGCTTTAGGAACACTTCTTTTGGTCTTTCTCAGGAAGAGATCACTGCTTCAGATCCTTTATCAAACGTGGATAAAGAAAAGGCAAACATATTGATGTATTGCACTGGAGGGATTCGATGTGATGTATATTCTACAATACTAAGGAGGCAGGGATTTCAGAATCTATATACCCTGAAGGGAGGTGTTTCTCACTATTTAAAGAACGAAGGGGCTGCTGAATGGGTGGGAAATTTATTTGTATTTGACTCCCGTTTGTCTCTCCCTCCTTCTGTTTACTATACTGGGGCCACAACCAAAGCAGAATTAACTCCAGTTTCTGGAGATGATAAGTTTGCAAAATGCCATGTATGTAATTTGGAAGTGAGTGAATTGAGACATAGGAACTGCGCAAATCTTGATTGTAATTTGCTTTTTCTATGCTGCACAAAATGTGTAAAGGATCTAAGAGGTTGTTGTTGTTTGACGTGCACTACTGCTCCTCGGCTTAGACCTGTTTTAAATGGAATGCAGAGATACAAAAAATGGCACAACTATCGGGATATGGATTTGCCAGAGCAATGA 1455 0.4268 MGLGLDYDPRLLLTAGRQRETVGEGGIGAARKRMRWCREVFSVRGSGSGSGAHAIALSLAPIVTASFCSKSLVLPFQNSPFKFKLTDSSSLALTHRKQLLPAALSLTQPSTAREDDFDFVVVNFYHFVFIQDPQAEVFKHRSFLELQDLDINGRVYVNEQGINAQYSGPSKDALAYVNWLRQDNRFSDILVQISPSENGHTFPALKLRYKPSLVQFEGGMSHLPLLDPSMRAIPLSPAEWKERLEAVNKTDLRAKDYHDRDFILLDVRNGFHEKSETEGHGYEWDIGHFRGTQRPSVDCFRNTSFGLSQEEITASDPLSNVDKEKANILMYCTGGIRCDVYSTILRRQGFQNLYTLKGGVSHYLKNEGAAEWVGNLFVFDSRLSLPPSVYYTGATTKAELTPVSGDDKFAKCHVCNLEVSELRHRNCANLDCNLLFLCCTKCVKDLRGCCCLTCTTAPRLRPVLNGMQRYKKWHNYRDMDLPEQ 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04975 484 ProSiteProfiles Rhodanese domain profile. 258 372 IPR001763 -
Vimu11g04975 484 CDD RHOD_YceA 235 365 - -
Vimu11g04975 484 Pfam UPF0176 acylphosphatase like domain 120 211 IPR040503 -
Vimu11g04975 484 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 112 469 IPR020936 -
Vimu11g04975 484 Gene3D - 228 397 IPR036873 -
Vimu11g04975 484 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 223 383 IPR036873 -
Vimu11g04975 484 Pfam Rhodanase C-terminal 374 455 IPR022111 -
Vimu11g04975 484 Gene3D - 108 214 - -
Vimu11g04975 484 SMART rhod_4 236 369 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04975 118 480 Sulfurtransferasese or Rhodanese AT1G17850 65.333 1.15e-179 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04975 - - gmx:100814358 749.584