Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04970 ATGGCCAAGAGATCAGATTTTGCACAGAAGCTGCTGGATGACCTCCGCCTCAGGAAACAACGAATGGCTTCGTCTCAAACTTCACACCAATCCCACCATTTTCCCATAGATGCATATGCTTACACAAAACAAGCATATAGAGGATCCAGACATACAAAAGCCAATGAAATTGTGACTTCCAGAACTGGGGTGACGCTGAATAGCTCAAATAGAAGCCACAGATCGGTAAACAATGGGCAAGTTTCAAACCAGATGGTCCCATATGGGAAAGGTCAGAGCTCAAGACTAACTGGTGACATGTCCCTTGCCCTGGCTTTTGCCTTAGAGAATGGAGGGAAACTAAAAAGAAGTGATTCAATTATGGGTTTCCTTCACCAGATTAACAGAGGAACATTGGAATTCAGCGTGTCAGAAAGACAATTAGCTTCAACTAGCAACTATCCTATCCAAATAAACGAGATATCCAAAGGTGCACACAAACTAAACCAGATTTTGAGAGCCTGCACCAATGGCCTTAACATGGACACGTATTCAATACAATTTGCAAAGGAACTATTGCAAGGAGCTATTGATTTGGAAGAGTCCCTCAGGATGCTAGTAGACCTGCAAAATAATTCACAGTTTATGATTACCTCGCAGAAGAAAAATCGAATCACACTATTAGAGGAGGATAATGATGACAACGATGACACGGGGATGGAAATGCAACTGACAAGATCAACTTTCTCTTTTGACAAACATACTACTCAGAACACCCAACAACTTGGAAAGGCTACTTTCATGCAGAGACCAATTACTCTTACAAGCTCTAAGGAAGACAGCAACTCAAATAATGAGAACAAAACTGTGAAGAGACAAGTTTCTCAGAAGCGATCAACTAAAACTAGCTCTATCTCTACCTCTGGCATTAAGAATGTCAATGCTAATTCAGAAGGGAAAAATCAGACGGCCTCCAACCCAGAGAAGGGAAGGATTCCAAATGTAATAGCCAAACTAATGGGGCTGGACATCCTTCCTGACAGAGTGGAAATGGATTCAAAACACGTGATGCTACAGAAAAGGGAAGGAATATCACCCAAGCATACTGCAAAAGGAAGCACTAAGAAGACTGAACTGCAGCGCAAAGAAACAGATAATTTGGTGCCTATAAAAGAGCAAAAAGACATAGAAGCTTTCAAAACTCCTGCAACAAAGGGTGAAGAGATGATATCGGGGGTAAATAAAAGTTTTCTTGTAGAAAAAACCAGCTCTGAGTTGTCTCTTCAGAATGGAATAAAAGCACTGAAAGAATTTGACAAGCAGACTAAAAGTTCAGCTGAAAAGAATCTTACTAGAGATGGTCAAAATTATGTTCAGGGGATAATAAAAAAAAAGGATCATCCAAATAACAATAACAGGGAACAGAAAGGCACTATAAGGGGCAGAACCGACTATCCAGTTCTTAACAATATGATATCCCAGCTGGAACAAGTGAAAGAAAGATCAGAAGTTAAGCCCTCGATTCAGCCAGAAAAGGTCGTCAATGCAAACAATGTTCAGCCTGAAAAAAGGCAAACAAACAAGAACATCACGAACAATGAAAAGAAGTCTCGGAACAATAATGGAATTCAAAAGACACATGTAGTCTCCAAAAATGGGCTTCATGAAGAAAAGCATCGCAGAGAACAACAACTCCAGGTTAGGGAAGAACAAATGCTGATGGTGAGACCACAAGGTGGGAGTGAAATCACCTCAAAGAATTCACCAAAATCCCCTCCTTCTCAGAAGAAGCAGCTATCCATGAACCAGGGGTTCAAGAAAAACAACGGAGAAAAAAATGTAGCTGCTATGAAATCGGAAGGCCTTTTAACAAATCATTATGATCTAGTCAGAGATGAAGCATCCAATTATACAAATGAGAAAGTAAAAGAAATTGTCCATAGGAAGTCAGGCCAAATTTCCTCTCCTAGGGATCAAGAATACGAACGGGCTAAGCGAAGTGGCCTTAGAACTTTGGTGGATGAAAAACACGTCTATAAGCTGGCCAGCAAGAAAATTAAGAATACCAAAAAGCAAAATGTAGACGCGATTGGGAAGATTGATCAAGTGTTGACTGGAAGAAAGGGAGCAAGGCTTATCACTAAACCAGGAAAACAGCAGATTCCCACTTCTGACAAATTCGAAGTTTTGAATGAAGCAGAACAAGAAAGGATTAGCTTGTTCAGAGAAACAGATGCACATATCATTAGCCCCAGTGAACAAGTATATGTGGATGCGACTGAACCATTGGATGTGAAGCGCCAACCCCATAAAGAATCTGAACTACCGCCTACATTCTCCAGTTCTGTTGGTGGAGAACTTCAAAGCCAACAAGATTTGGTAGCAACAGTTCCCAGTGATTTGCATTGCCAAGATGTGTTATCATTGCAAGATCCTGTTGCAGCAGATGAAAGATTCGTGACTGGTGAGGTTGCATTACAGAAAGCAAATGGAATTCTGGAAGACAGATTGCGTGTTAAGCACTCAAACCTAGAAGATCAGAATATTTGTGAAAAAAGCTTCCAACAGCCACTAACAGAAAGTGAAAACTGCCTCAAGTGGATTCTGGTCATGAGTCAACTATTCGTCAACACTGCAGAAGGACTTTTCAAACTGAACATCCCATTTAACGTTCTTCAAGGTTGTGGTCGGGATATTCAAGACGAAGGTAGCAAACTTATATTAGATTGTGGATATGAAGTGATGAAAAGAAAGGGGATAAGGCAAGAACTCAAAAGAGTTCATAGTTATTCGAGGATATCAATGGGTACCACCAACATAATATCCTTTGATGAGTTAGTTAGGCAGCTGAATAAAGACACGGAGAAGCTCAAGTTCTACGGTAGAAAAACAAGTTGCCAAGTCGATGTTGAGGACTACCTACCTAAAATGCTTGAACATGATGTTTATGACAAAGATCCAGACGTGAACTGCATGTGGGATTTAGGATGGAATGATGAGACAGTTGCATTTATAGAGAAATACGATGTTATAAGGGATACGGAAAAGAATATTCTTAGTGTTCTACTGGATGAGATCACCCTAGAATTTTGCACGTACAATCATACACCGAAACAGTAG 3099 0.404 MAKRSDFAQKLLDDLRLRKQRMASSQTSHQSHHFPIDAYAYTKQAYRGSRHTKANEIVTSRTGVTLNSSNRSHRSVNNGQVSNQMVPYGKGQSSRLTGDMSLALAFALENGGKLKRSDSIMGFLHQINRGTLEFSVSERQLASTSNYPIQINEISKGAHKLNQILRACTNGLNMDTYSIQFAKELLQGAIDLEESLRMLVDLQNNSQFMITSQKKNRITLLEEDNDDNDDTGMEMQLTRSTFSFDKHTTQNTQQLGKATFMQRPITLTSSKEDSNSNNENKTVKRQVSQKRSTKTSSISTSGIKNVNANSEGKNQTASNPEKGRIPNVIAKLMGLDILPDRVEMDSKHVMLQKREGISPKHTAKGSTKKTELQRKETDNLVPIKEQKDIEAFKTPATKGEEMISGVNKSFLVEKTSSELSLQNGIKALKEFDKQTKSSAEKNLTRDGQNYVQGIIKKKDHPNNNNREQKGTIRGRTDYPVLNNMISQLEQVKERSEVKPSIQPEKVVNANNVQPEKRQTNKNITNNEKKSRNNNGIQKTHVVSKNGLHEEKHRREQQLQVREEQMLMVRPQGGSEITSKNSPKSPPSQKKQLSMNQGFKKNNGEKNVAAMKSEGLLTNHYDLVRDEASNYTNEKVKEIVHRKSGQISSPRDQEYERAKRSGLRTLVDEKHVYKLASKKIKNTKKQNVDAIGKIDQVLTGRKGARLITKPGKQQIPTSDKFEVLNEAEQERISLFRETDAHIISPSEQVYVDATEPLDVKRQPHKESELPPTFSSSVGGELQSQQDLVATVPSDLHCQDVLSLQDPVAADERFVTGEVALQKANGILEDRLRVKHSNLEDQNICEKSFQQPLTESENCLKWILVMSQLFVNTAEGLFKLNIPFNVLQGCGRDIQDEGSKLILDCGYEVMKRKGIRQELKRVHSYSRISMGTTNIISFDELVRQLNKDTEKLKFYGRKTSCQVDVEDYLPKMLEHDVYDKDPDVNCMWDLGWNDETVAFIEKYDVIRDTEKNILSVLLDEITLEFCTYNHTPKQ 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04970 1032 MobiDBLite consensus disorder prediction 570 600 - -
Vimu11g04970 1032 MobiDBLite consensus disorder prediction 571 600 - -
Vimu11g04970 1032 MobiDBLite consensus disorder prediction 459 473 - -
Vimu11g04970 1032 PANTHER OS01G0228800 PROTEIN-RELATED 8 1024 - -
Vimu11g04970 1032 MobiDBLite consensus disorder prediction 454 475 - -
Vimu11g04970 1032 Pfam DUF761-associated sequence motif 324 340 IPR032795 -
Vimu11g04970 1032 MobiDBLite consensus disorder prediction 512 539 - -
Vimu11g04970 1032 MobiDBLite consensus disorder prediction 268 324 - -
Vimu11g04970 1032 MobiDBLite consensus disorder prediction 66 85 - -
Vimu11g04970 1032 MobiDBLite consensus disorder prediction 268 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04970 Vimu-Chr11 68998130 69003214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04970 1 348 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 38.843 7.05e-51 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04970 - - pvu:PHAVU_002G333000g 1703.72