Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04966 ATGAGGAGGGCTACAGGGGGCAGTTGGTTATCTGTAAGTCAAGGGATAGCAGAGGATACATCTGATCTTGTATCAGGATTTGCCACAGTTGGCGACGGGTTGAGTGAATCTATTGACTATCCAAATGAATATTGGGACTCCGACGAATATGATGATGACGAGGATGTTGGCTACATGAGGCAACCCATTGACGATGAGACCTGGTTTTTGGCTCATGAAATTGATTACCCTAGTGACAATGAAAAAGGGGCTGGCCATGAAAGTGTTCCGGATCATCAGGAAAGAGGTCTGGCCAAAGATGAGGATGACGACCAATCTTTTGCCGAGGAAGATTCTTACTTTTCTGGGGAGCGATATCTTCAGGCAAATAATGTTGAGCCAGTCACAGCTACTGATGATTCTATTGGTCTGACAGTTACCGAGTATGGAAGGGCCAATGATAATGATTTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAATTGAACCTTATGTGTGCAGAACCAGTCTGGCGGGGCTTTGTCCCTCAGACTAATGAACTCATCATGCTAGGAGATGGGAGGGTGTTGAATGATAATGTAAGATCACGGCTAGAGAACATCAAAATGGATGATGATCAGCATGGTTCGGTTAGGTCAATTGGGGTAGGGATCAATAGTGATGTTGCAGATATTGGTAGTGAAGTGCGTGAAAGTTTGGTTGGTGGTAGTGGTGAAGGAGATGTTGAATATTTCCATGATGGTGATGCCAGGCTTGGTGGCAGGCACCCCCATCGTGACTTGGACAAGAAATCTACTAACAAATCAAATATAAGTAAGAACAATGACCAGAGTGAGTCAAATAAATATGTCATAGGATGTGACAGACCTGCACAGTTCCAGATAAAAACTCATGGTGATGGGAACTTCTCTTTTCCCCTATCTTTGAAGGATGGTGATATAATTCAGGCTTCCACCGATAAGTCCCTGTGGTCAAATAACGACAATGCAGATGAAATTGATGACTGTCTTAGTGCATTTGTGGAAACTGATGACATGCTTGCTTCGTGGAGGCGAAAGAGTAGTGATTCATCACCTGCTAGAAGTTCTAGGGGTGATAATAATGCTAACAATGTAAGATCTGCGAACTCTTCTCCAACAACAATTTCAAATTATGGATATTCTGAAAGAGAGGGTGTGAAGGTGGAGGAGGATGAAAAAACTGGAATTGCTAGGGAAGATGACCTAGGAGCAGAGGATGAAGAGGTAGCTGCTGTGCAAGAGCAAGTAAGGCAGATAAAGGCACAGGAAGAGGAATTTGAAACTTTCAATCTAAAGATTGTTCACAGGAAAAACAGGCATGTTTTTAATACGTGGTATTTGTTTGTGCTCATATGTTGA 1386 0.4271 MRRATGGSWLSVSQGIAEDTSDLVSGFATVGDGLSESIDYPNEYWDSDEYDDDEDVGYMRQPIDDETWFLAHEIDYPSDNEKGAGHESVPDHQERGLAKDEDDDQSFAEEDSYFSGERYLQANNVEPVTATDDSIGLTVTEYGRANDNDLMAQYDGQLMDEEELNLMCAEPVWRGFVPQTNELIMLGDGRVLNDNVRSRLENIKMDDDQHGSVRSIGVGINSDVADIGSEVRESLVGGSGEGDVEYFHDGDARLGGRHPHRDLDKKSTNKSNISKNNDQSESNKYVIGCDRPAQFQIKTHGDGNFSFPLSLKDGDIIQASTDKSLWSNNDNADEIDDCLSAFVETDDMLASWRRKSSDSSPARSSRGDNNANNVRSANSSPTTISNYGYSEREGVKVEEDEKTGIAREDDLGAEDEEVAAVQEQVRQIKAQEEEFETFNLKIVHRKNRHVFNTWYLFVLIC 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04966 461 Coils Coil 411 441 - -
Vimu11g04966 461 MobiDBLite consensus disorder prediction 247 271 - -
Vimu11g04966 461 MobiDBLite consensus disorder prediction 79 109 - -
Vimu11g04966 461 MobiDBLite consensus disorder prediction 354 389 - -
Vimu11g04966 461 MobiDBLite consensus disorder prediction 79 102 - -
Vimu11g04966 461 MobiDBLite consensus disorder prediction 247 284 - -
Vimu11g04966 461 MobiDBLite consensus disorder prediction 352 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04966 Vimu-Chr11 68980777 68982162 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04966 - - gmx:100797095 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00522 7 5426669 5432407 Vimu11g04966 11 68980777 68982162 ECH
Vimu11g04966 11 68980777 68982162 Vimu11g04966 11 68980777 68982162 ECH
Vimu11g04966 11 68980777 68982162 Vimu8g01713 8 22957467 22963851 PCT