Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04893 ATGGTGGGAGTTGTCTCATCATGTGATCTGGAGGTCAAAAGTTCTTGTGGAACACAAATCGGCCTCTTAAAGGCAAGGCTGCCTGCTATAGACCTACTTGGTGGTCTACCTTTCCTTAGCATTGCACATGGCAGGAACCTTATGGTGCTGGACCACCCTTATTGTGTTGCTGTATATGGGCTTCATAGGGCTGTTAATAACTCTATTTGCATTGAGAAGTTCTCTGATTTCCCGCAACTTGGGAGGTTCACTCTTCGCACTGAAGGAAAAACTGTTGCCGTGGGAAAAGTGACTGGTCTGACAGGAATTCGTGCACAAATTAGTGGAGTGGCAGCATTGAGGCATAGTTGA 351 0.4644 MVGVVSSCDLEVKSSCGTQIGLLKARLPAIDLLGGLPFLSIAHGRNLMVLDHPYCVAVYGLHRAVNNSICIEKFSDFPQLGRFTLRTEGKTVAVGKVTGLTGIRAQISGVAALRHS 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04893 116 Pfam Elongation factor Tu C-terminal domain 65 99 IPR004160 -
Vimu11g04893 116 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 66 100 IPR009001 -
Vimu11g04893 116 Gene3D Translation factors 41 100 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04893 53 98 Eukaryotic Initiation Factors Gene Family AT5G10630 42.857 3.52e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04893 K03267 - qsa:O6P43_005153 75.8701