Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04862 ATAGAAAGAGAGAGAAAGGTCTCTGTTTCTTCACTTGTTCACAAGCCGCAACTGCTACTGTGTATCCAATCTGAAGCTCAAGATATGGTTAGTTTGTTACTGCATCTTGAATATTGCCATTTGAGAGCCATTTTACTGTGGATTCTTGAATTCCTTTTGCAATGGATTTTTCAGGGGGGCGAGAACCTTTCTCCCAAGGAAAGGAGTAAAGATTGGGTTGGAGTTCTTATGAACAGCACCTTTGGTTATTGTGATTTCCACCATGACCTTCGATCTAATGAGAAGAATGTGTTCTGCGTCGACTGTGCACTTAGGATGTGTAGGCACTGTAAGGAAGCTCATTCCCTACATAGAAGGTTTCAGATTTACAAATATTCCTATCAGGATGTCTTCCGCCATGCCGAATTGCAGAAGTATTTTGACTGCTCTAAAATTCAGACTTACATATCAAATAATGAAAGGATTGTGCACCTCAAACCTCGGCCTTCAATCAACAAATCTAAATCTGATCTAAGTCCCGAGTCTAAATCCAAAGAACCCAGCATAAGACCGAAAACTGGAGGCAAGTGTGAAGAATGTGGAAAACACTTGCAAGATGAACGTAACCGTTTCTGCTCCATTACATGCAAGATCGCAGTGCTTCCAATGGAGACTGAAAACCAAAGTGGTAGGAGCATGCTCACTCCAAAATCTGAAGGCATTGATTTCAATATGAACGATAATCATAATTCAGAACCAGAGTCATCAATATCTGAAGCTGAGCCGTATGGGTGGGTTGAAGTTGTGAATTTCAGAAAGCGTCCAAGGAAAAGTACGCCTCAGAGGCCAGTCTTCGTTTTCACTTCATAG 849 0.4146 IERERKVSVSSLVHKPQLLLCIQSEAQDMVSLLLHLEYCHLRAILLWILEFLLQWIFQGGENLSPKERSKDWVGVLMNSTFGYCDFHHDLRSNEKNVFCVDCALRMCRHCKEAHSLHRRFQIYKYSYQDVFRHAELQKYFDCSKIQTYISNNERIVHLKPRPSINKSKSDLSPESKSKEPSIRPKTGGKCEECGKHLQDERNRFCSITCKIAVLPMETENQSGRSMLTPKSEGIDFNMNDNHNSEPESSISEAEPYGWVEVVNFRKRPRKSTPQRPVFVFTS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04862 282 MobiDBLite consensus disorder prediction 159 187 - -
Vimu11g04862 282 ProSiteProfiles Zinc finger B-box type profile. 79 122 IPR000315 GO:0008270
Vimu11g04862 282 MobiDBLite consensus disorder prediction 231 252 - -
Vimu11g04862 282 MobiDBLite consensus disorder prediction 231 250 - -
Vimu11g04862 282 MobiDBLite consensus disorder prediction 171 187 - -
Vimu11g04862 282 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 67 233 - -
Vimu11g04862 282 Pfam PLATZ transcription factor 124 211 IPR006734 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vimu11g04862 PLATZ 2.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04862 - - gmx:100815813 409.838