Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04853 ATGGCAGCCGCCGAACACGGAATAAGCGTCGAACCTGAGAGAAAGAGCCTTCTCAGCCAACACACCGAGAAGCACTTCACCGCCGGCGAAATAGTCCGCGACATCATCATCGGCGTTTCCGACGGCCTCACCGTCCCCTTCGCCCTCGCCGCCGGCCTCTCCGGCGCCAATGCCACCTCCTCCATCGTTCTCACCGCTGGCATAGCCGAAGTCGCCGCCGGCGCCATCTCCATGGGGCTCGGCGGTTATTTGGCAGCAAAAAGTGAAACCGATAATTACCGGAGGGAATTGAAAAGAGAGCAAGAAGAAATCATCACGATGCCGGAAACTGAAGCGGCAGAGGTAGCAGAAATACTAGCTCAGTATGGGATCGAGGCACACGAATATGCACCTGTGGTGAATGCTCTCAGAAAAAACCCTCAGGCATGGCTTGATTTCATGATGAAATTTGAGCTGGGACTAGAGAAACCAGATCCAAAGAGAGCATTGTATAGTGCAATGACAATTGCCATCGCTTACATATTGGGAGGGGTTGTCCCTCTCCTTCCTTACATGTTCATTCCAAGGGCGTCAGAAGCGGTTGTGTTCTCAGTTATAGTGACCTTGGTTGCATTGCTGGTTTTTGGTTATGCCAAGGGTTACTTTACGGGCAATAAACCATTCAGGAGTGCTTTGGAAACAGCTCTAATAGGTGCCATCGCCTCTGCAGCTGCTTTTGGTATGGCAAAGGCTTTCAATCCATAG 744 0.5161 MAAAEHGISVEPERKSLLSQHTEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIAEVAAGAISMGLGGYLAAKSETDNYRRELKREQEEIITMPETEAAEVAEILAQYGIEAHEYAPVVNALRKNPQAWLDFMMKFELGLEKPDPKRALYSAMTIAIAYILGGVVPLLPYMFIPRASEAVVFSVIVTLVALLVFGYAKGYFTGNKPFRSALETALIGAIASAAAFGMAKAFNP 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04853 247 Coils Coil 83 103 - -
Vimu11g04853 247 Pfam VIT family 32 242 IPR008217 GO:0005384|GO:0030026
Vimu11g04853 247 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 16 245 IPR008217 GO:0005384|GO:0030026
Vimu11g04853 247 CDD CCC1 11 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04853 Vimu-Chr11 68327289 68329420 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04853 1 243 Nodulin-like Gene Family AT3G43660 23.361 1.21e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04853 K22736 - gmx:100793585 404.831