Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04850 ATGGCTGTCACCTTGGAAGCTGAGAAACAGGGCCTTCTCAATCTCCACACTGAGAAGCACTTCACCGCCGGCAAAGTCGTCCGCGACATCATCATTGGCGTTTCCGATGGCCTCACTGTTCCCTTCGCTCTCGCCGCCGGCCTCTCCGGCACGAATGCGACCTCCGCCATCGTTCTCACTGCCGGCATAGCCGAAGTCGTCGCGGGCGCCATCTCAATGGGTCTCGGCGGTTATTTGGCAGCGAAAAGTGAAGCCGATCATTACGACAGAGAAGTGAAAAGGGAGCAAGAAGAAATAATAGCCGTGCCAGAAACTGAGGCAGCAGAGGTAGGAGAAATACTAGCTGAGTATGGAATAGAGGCACACGAATATGCACCTGTGGTCAATGCTCTCAGAAAAAACCCTCAGGCATGGCTTGATTTCATGATGAAGTAA 435 0.531 MAVTLEAEKQGLLNLHTEKHFTAGKVVRDIIIGVSDGLTVPFALAAGLSGTNATSAIVLTAGIAEVVAGAISMGLGGYLAAKSEADHYDREVKREQEEIIAVPETEAAEVGEILAEYGIEAHEYAPVVNALRKNPQAWLDFMMK 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04850 144 Coils Coil 78 98 - -
Vimu11g04850 144 Pfam VIT family 27 144 IPR008217 GO:0005384|GO:0030026
Vimu11g04850 144 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 12 128 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04850 Vimu-Chr11 68313874 68314751 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04850 8 95 Nodulin-like Gene Family AT3G43630 29.474 5.33e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04850 K22736 - gmx:100814227 246.899